Methanosarcina sp. MTP4: MSMTP_0071
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Entry
MSMTP_0071 CDS
T03850
Name
(GenBank) Cell division protein FtsH
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
metm
Methanosarcina sp. MTP4
Pathway
metm04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
metm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
MSMTP_0071
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
metm03019
]
MSMTP_0071
03009 Ribosome biogenesis [BR:
metm03009
]
MSMTP_0071
04131 Membrane trafficking [BR:
metm04131
]
MSMTP_0071
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
metm04147
]
MSMTP_0071
Messenger RNA biogenesis [BR:
metm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
MSMTP_0071
Ribosome biogenesis [BR:
metm03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
MSMTP_0071
Membrane trafficking [BR:
metm04131
]
SNARE
SNARE associated proteins
Others
MSMTP_0071
Autophagy
Aggrephagy
Other aggrephagy associated proteins
MSMTP_0071
Exosome [BR:
metm04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
MSMTP_0071
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
CDC48_2
AAA_16
AAA_2
AAA_5
TIP49
AAA_14
AAA_22
AAA_33
AAA_17
nSTAND3
AAA_28
Sigma54_activat
ABC_tran
AAA_7
AAA_3
Mg_chelatase
IstB_IS21
RNA_helicase
AAA_18
NPHP3_N
DUF815
Zeta_toxin
Vps4_C
TsaE
PhoH
Parvo_NS1
NB-ARC
AAA_24
ATP-synt_ab
SLFN-g3_helicase
AAA_11
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AKB23540
LinkDB
All DBs
Position
90295..92517
Genome browser
AA seq
740 aa
AA seq
DB search
MTEDVNLRVAEAYHKDVGRGIARIDTRLMQQMGLVSGDIIEISGKANTYAIVWPNVERGP
GQENRIRIDGNLRSNAKVGIDDKVTIQKVRAKHAQRVTLTPSQSVRLVGGAHYILRIIEG
RPLNKGQQIRVETVNNPLTFVVTSTKPAGPVVVTKDTEIVIKEKSLEEIKTPEGISYEDI
GGLRREIQLVREMIELPLRHPELFQKLGIEPPKGVLLHGPPGTGKTLIAKAVASETDSNF
ITISGPEIVSKYYGESEHKLREIFEEAERDAPSIIFIDEIDSIAPKREEVTGEMERRVVA
QLLSLMDGLQSRGEVVVIAATNRPNSIDEALRRGGRFDREIEIGIPDRNGRKQVLLIHTR
GMPLEKDINLSEIADVTHGFVGADLSSLCKEAAMHALRRITPDIDIDEEIPQEVLDNLEV
KKEDFREALKNIEPSAMREVFVEVAHVEWGDIGGLEKAKQELVEAVEWPLKYPEMFRLVK
IKPPRGVLLFGPPGTGKTLLAKAVASESDANFISIKGPELLSKYVGESERAIRETFRKAK
QAAPTVVFFDEIDSIAPQRSAVSDTHVSERVVSQILTELDGIEELKDVIIVAATNRPDMV
DPALLRPGRFDRLIYIRPPDKASREKIFGIHLKDKPLAEDVSFSELAEKTEGYVGADIEG
ICREAAMLALREVICSGISRKELMERARNIKLTKKHFGQAVRRVKPTTSRETLGIYEQSA
ELFAKHATEIDEGVCEISNE
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgactgaagacgtaaacttgagagtcgccgaagcttatcacaaggatgttggaaggggc
attgcaaggatcgacacccgcctgatgcagcagatgggacttgtgagcggggatataatt
gagatctcaggcaaagccaatacctacgccattgtctggccgaacgtggaacgcggaccc
gggcaggaaaaccggattcggatagacggaaacctgcgcagcaatgcaaaagtagggatt
gacgataaggttacgatccagaaagtccgggcaaaacacgcccagagagtcaccctgact
ccttcccagtcggtaaggcttgtcgggggtgcccattacatcctcaggatcattgagggg
aggcctcttaacaaggggcagcagatcagggtggagaccgtaaacaaccccctgactttc
gtggttacgtctacaaagcccgcaggcccggttgtggttacaaaagataccgagatcgtc
atcaaggaaaagtctcttgaggagatcaagactccggaaggtatctcctatgaggatatc
ggagggctcaggcgggaaatccagcttgtcagggaaatgatcgaacttcctctcaggcac
ccggagcttttccagaaactcgggatcgaacctccgaaaggtgtgcttttgcacgggccc
cccggaaccggcaagaccctgattgcaaaagctgttgccagcgaaacagattctaacttc
attaccatcagcggcccggaaattgtctcaaaatactacggggaaagtgagcataaacta
agggaaatctttgaggaagcggaaagggacgccccttcaatcatcttcatagacgagatc
gattccattgccccgaagcgtgaagaagtcaccggggaaatggaacgcagggtcgttgcc
cagctgctttccctgatggacgggctgcagtccaggggtgaggttgtggtgattgctgcc
acgaaccgtccgaactccatcgacgaagccctccggagaggcgggaggttcgaccgggaa
atagagattgggatccctgaccggaacggcaggaagcaggtcctccttatccataccagg
ggtatgcctcttgaaaaagacataaacctttccgagattgctgacgtgacccacggtttc
gtgggcgcggacctgtcttccctttgtaaggaagctgccatgcacgccctcaggcggatc
actcccgatattgatatcgatgaagagatccctcaggaggtcctggacaacctggaggtc
aagaaggaagacttcagagaagccctgaagaacatcgaaccctctgcaatgcgtgaagtc
tttgtggaagtggcccatgtggaatggggagacatcggagggcttgaaaaagcaaaacag
gaacttgtcgaagccgtggaatggcctctcaagtaccccgaaatgttcaggttagtcaaa
ataaagcctcccaggggagtgctgcttttcgggccgccgggtacggggaagaccctgctt
gcaaaagccgttgccagtgaaagcgatgctaactttatcagcatcaagggccccgaactt
ctcagcaagtacgttggggaatccgagcgggcgatccgggagactttccggaaggcaaag
caggctgctccaacggtggtgttctttgacgagatcgattccattgctccccagaggagt
gccgtttcggatacccacgtttccgaaagggttgtaagccagatcctgaccgaacttgac
gggatcgaggagcttaaagatgttatcatcgtggctgccacgaaccgtccggatatggta
gacccggctctccttcgtccgggacgtttcgacaggctcatatacataaggcctcccgat
aaggctagcagggagaaaatctttgggatccacctgaaagataaaccccttgcagaagat
gtaagctttagcgaacttgcagagaaaaccgagggttatgtgggagccgatatcgaaggt
atttgcagggaagctgcaatgcttgccctccgggaagtgatctgctccgggatcagcaga
aaggagctcatggaaagggcaaggaacatcaagcttacgaagaagcactttggacaggca
gtccgccgggtgaaacccacaacctcaagggagacgctcgggatttacgaacaaagtgcc
gaactctttgctaaacatgccaccgagattgacgaaggagtttgcgaaattagtaatgaa
taa
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