Methanosarcina sp. MTP4: MSMTP_0299
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Entry
MSMTP_0299 CDS
T03850
Name
(GenBank) Iron-dependent repressor IdeR/DtxR
KO
K03709
DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
Organism
metm
Methanosarcina sp. MTP4
Brite
KEGG Orthology (KO) [BR:
metm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
metm03000
]
MSMTP_0299
Transcription factors [BR:
metm03000
]
Prokaryotic type
Helix-turn-helix
Other families
MSMTP_0299
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fe_dep_repr_C
Fe_dep_repress
FeoA
MarR
HTH_24
TrmB
HTH_5
HTH_11
WHD_HrcA
Rrf2
HTH_IclR
MarR_2
HTH_27
HTH_Crp_2
WHD_RNase_R
LexA_DNA_bind
PH0730-like_N
HTH_PafC
DUF7343
DUF2250
GntR
Dimerisation
Staph_reg_Sar_Rot
HTH_AsnC-type
HTH_20
HTH_Cmi2_C
KPWE_dom
Rio2_N
HTH_micro
Motif
Other DBs
NCBI-ProteinID:
AKB23768
LinkDB
All DBs
Position
371165..371830
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AA seq
221 aa
AA seq
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MHTERLEEYLETILYLIMKNQGPAKTKQIADELNVAPPSVTEMIKKLSSMGFVEHIPYKG
VELTYKGTEKAIKIKRKHQVLETFLADVLDLDRKVAHREACELEHAVSDHVLERLYEFLG
SPEYCPDGHPINIDKCTLGEQERFIPLDEMKEGSSGTVARVTLPREAKERLNSLGILTGK
EIEVRRKQKQGCISVIAVGSEIALGRDVAKKIFITPCGGSS
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgcacactgaacgattggaagaatacctcgagacaattttatacctcataatgaaaaac
cagggcccggccaagaccaaacaaatagccgacgagctcaacgttgctcctccaagtgtg
acggaaatgatcaagaaactttcctccatggggtttgtggagcatatcccttacaagggt
gtggaactgacctataaagggactgaaaaggctataaaaatcaagcggaaacaccaggtg
cttgagactttccttgcagatgtccttgatttagaccggaaggtggctcacagggaagcc
tgtgaactcgaacacgcggtttcggatcacgtgcttgaaaggctgtacgaattccttggc
agtcccgagtactgccctgacgggcatcccattaacattgataaatgcacccttggggag
caggaacgtttcattcctcttgacgaaatgaaagaagggagctccgggactgttgcccgg
gtgactcttcccagggaagcaaaggaacgtctgaactccctcgggatcctgaccggaaaa
gaaattgaagtccggcgcaagcagaagcagggatgcatttcggtaatagccgttgggtcg
gaaattgccctgggcagggatgtagccaaaaaaattttcataactccttgcggcggcagc
tcttga
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