Methanosarcina sp. MTP4: MSMTP_0348
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Entry
MSMTP_0348 CDS
T03850
Name
(GenBank) Oligopeptide transport system permease protein OppB
KO
K02031
peptide/nickel transport system ATP-binding protein
Organism
metm
Methanosarcina sp. MTP4
Pathway
metm02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
metm00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
MSMTP_0348
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
metm02000
]
MSMTP_0348
Transporters [BR:
metm02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
MSMTP_0348
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
SMC_N
AAA_21
AAA_22
AAA_16
AAA_29
nSTAND1
MTBMA_p00010_2nd
Motif
Other DBs
NCBI-ProteinID:
AKB23817
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Position
complement(426661..427644)
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AA seq
327 aa
AA seq
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MTRILTACNPGVQGVSPPLLEIRDLKVHFPDGAGPVKAVDRIDLTVRDKECFGIIGESGS
GKTVLCLAILGLLPEDASCSGEVLFRGKTLFSMSAPGIRELHGREIGAIFQNPAASLDPV
FTVGNQLSEALGRGAGVSGTDMKKNVMQLLDRVSIKEPALRIRQYPHELSGGLRQRVMVA
MGIAAEPSLIVADEPTSGLDLRVKRRVISLLQEISQDTAMFVITHDLELAEKLFETLAVM
YAGEIVEIASCKEFFQAPMHPFSEGLLNSLPSRGMQPIPGSSPSLLALPTGCRFFPRCRH
AMEVCKTRHPELYSVEGKRQVRCFKYA
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgacccggatccttacggcctgtaaccccggcgtccagggggtctctccacccctactt
gagatccgggatttgaaagtccattttcctgacggcgccggtcccgtaaaagccgttgac
aggatcgaccttacagtcagggataaggagtgctttggaatcatcggggaatcaggatca
ggaaaaacggtgctttgtctggcgattctaggactccttcccgaagatgcgtcctgttca
ggagaggtcctgttcagggggaaaacacttttttctatgtctgccccagggatcagggaa
cttcacggaagggaaataggggcaatttttcaaaaccccgcagcttcccttgaccccgta
tttacggtagggaaccagctttcggaagccctgggcagaggtgcaggagtttcagggacg
gatatgaaaaaaaatgtgatgcagctcctggacagggtcagcatcaaagagccggccctc
cgcataaggcagtatccccacgagctgagcgggggcctgagacagagggtgatggttgcc
atgggaattgcagccgagccctcgcttatcgttgcagacgaacccacaagcgggctagac
ctcagggttaagcgcagagtcatatccctcctgcaggaaatcagccaggatacggcaatg
tttgttatcacacatgacctggaacttgcggaaaaactctttgaaacccttgctgtgatg
tatgctggagaaattgtcgaaattgcaagctgcaaagagtttttccaggcccccatgcac
cctttttcagaggggcttctgaattctcttccctcgagggggatgcaaccgatcccgggg
tcaagcccttccctgcttgccctaccgacggggtgcaggtttttcccacggtgcaggcat
gcaatggaggtttgcaaaaccaggcatccggaactatattctgtggaggggaagcggcag
gtgaggtgttttaagtatgcttga
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