KEGG   Methanosarcina sp. MTP4: MSMTP_0422
Entry
MSMTP_0422        CDS       T03850                                 
Name
(GenBank) LSU ribosomal protein L40e
  KO
K02927  ubiquitin-large subunit ribosomal protein L40e
Organism
metm  Methanosarcina sp. MTP4
Pathway
metm03010  Ribosome
Brite
KEGG Orthology (KO) [BR:metm00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    MSMTP_0422
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    MSMTP_0422
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:metm03011]
    MSMTP_0422
   04121 Ubiquitin system [BR:metm04121]
    MSMTP_0422
Ribosome [BR:metm03011]
 Ribosomal proteins
  Eukaryotes
   Large subunit
    MSMTP_0422
  Archaea
    MSMTP_0422
Ubiquitin system [BR:metm04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   MSMTP_0422
SSDB
Motif
Pfam: Ribosomal_L40e Zn_Ribbon_1 DZR DZR_2 zf-AtTam37 Cas12f1-like_TNB Zn_ribbon_ZPR1 Zn_ribbon_RPAB4 Zn_ribbon_3 Zn_ribbon_RanBP Zn_ribbon_LapB zf-ChsH2
Other DBs
NCBI-ProteinID: AKB23891
UniProt: A0A0E3L5U7
LinkDB
Position
complement(504848..504997)
AA seq 49 aa
MARFPEAEERLLNKKICMKCNARNAVRATRCRKCGYEGLRVKSKESKGA
NT seq 150 nt   +upstreamnt  +downstreamnt
atggctagattcccagaagcagaagaaaggttactaaacaaaaagatctgcatgaaatgc
aatgccagaaacgcagtaagggcgacccgctgcaggaaatgtggctacgaaggccttcgc
gtaaaatccaaggaatccaagggagcatga

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