Methanosarcina sp. MTP4: MSMTP_0422
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Entry
MSMTP_0422 CDS
T03850
Name
(GenBank) LSU ribosomal protein L40e
KO
K02927
ubiquitin-large subunit ribosomal protein L40e
Organism
metm
Methanosarcina sp. MTP4
Pathway
metm03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
metm00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
MSMTP_0422
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
MSMTP_0422
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
metm03011
]
MSMTP_0422
04121 Ubiquitin system [BR:
metm04121
]
MSMTP_0422
Ribosome [BR:
metm03011
]
Ribosomal proteins
Eukaryotes
Large subunit
MSMTP_0422
Archaea
MSMTP_0422
Ubiquitin system [BR:
metm04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
MSMTP_0422
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_L40e
Zn_Ribbon_1
DZR
DZR_2
zf-AtTam37
Cas12f1-like_TNB
Zn_ribbon_ZPR1
Zn_ribbon_RPAB4
Zn_ribbon_3
Zn_ribbon_RanBP
Zn_ribbon_LapB
zf-ChsH2
Motif
Other DBs
NCBI-ProteinID:
AKB23891
UniProt:
A0A0E3L5U7
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All DBs
Position
complement(504848..504997)
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AA seq
49 aa
AA seq
DB search
MARFPEAEERLLNKKICMKCNARNAVRATRCRKCGYEGLRVKSKESKGA
NT seq
150 nt
NT seq
+upstream
nt +downstream
nt
atggctagattcccagaagcagaagaaaggttactaaacaaaaagatctgcatgaaatgc
aatgccagaaacgcagtaagggcgacccgctgcaggaaatgtggctacgaaggccttcgc
gtaaaatccaaggaatccaagggagcatga
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