Methanosarcina sp. MTP4: MSMTP_0780
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Entry
MSMTP_0780 CDS
T03850
Name
(GenBank) Phosphoesterase
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
metm
Methanosarcina sp. MTP4
Pathway
metm03410
Base excision repair
metm03430
Mismatch repair
metm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
metm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MSMTP_0780
03430 Mismatch repair
MSMTP_0780
03440 Homologous recombination
MSMTP_0780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
metm03400
]
MSMTP_0780
DNA repair and recombination proteins [BR:
metm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
MSMTP_0780
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
MSMTP_0780
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MSMTP_0780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHHA1
DHH
Motif
Other DBs
NCBI-ProteinID:
AKB24249
UniProt:
A0A0E3NUL3
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Position
945025..946023
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AA seq
332 aa
AA seq
DB search
MKEPHDLLTAKTLILTHGDSDGICSGAIAKSAYLDASVYFTNPVSLLDKLNEIRDVKNLI
ICDIAINERHCFELYSRLQDLAKKCNLYYIDHHPLPESCMEDEKGGEEWFYNDCTGPCSS
ELTFRVFEDLLSRDMRRVAIYGAIGDFCDNTPHVKHWVRDWDKRSLYFQAGTLIQAVLQK
GKDYEFKRTLLNPLSRDRIPSRIPDLLELARDAALNEEKIRVFVKQNVKVLKNSAYIVNT
NNSISKAAIYAASYGRREVGIAAEHRPKKGIYDLSIRSRGHADVNRLLRSIAPRFGGSGG
GHPHAGGARIPEESFEAFLHAFDAGLGEAEMR
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaccccacgacttgctaacagcaaaaaccctgatcctgacccacggagattcg
gacgggatatgctcgggtgccattgcaaagagtgcctacttggatgcatccgtatacttc
acaaatccggttagccttctggataagctgaacgagatcagagacgttaaaaacctcatc
atctgtgacatcgcaattaatgaaaggcactgcttcgaactttactccaggctccaggac
cttgctaaaaagtgtaacctctactacattgaccaccaccctctcccggaaagctgtatg
gaagatgaaaaagggggagaagaatggttttacaatgactgcacaggaccctgcagttct
gaactaaccttccgtgtctttgaagatcttctgagccgggacatgaggagggttgctatc
tacggggctataggggacttttgcgacaacacgccccacgtgaagcactgggtaagggac
tgggacaagcgaagcctctacttccaggcagggaccctgatccaggcggtgctccagaaa
ggcaaggactacgaattcaagaggactctcctgaatcctctctcaagggataggattcct
tcaaggattccggacctcctggaacttgcccgggatgcggccctgaacgaagaaaagatc
cgggtctttgtcaaacaaaacgtgaaagtcctgaaaaacagcgcgtatattgtaaatacg
aataactccatttcaaaagcagctatctacgcagcctcatacggccggagggaagttggt
attgcagccgaacaccgtccgaaaaaagggatatacgacctgagcatccgttccaggggg
catgcagacgtgaaccggctcctgcgcagcattgctccccggttcggaggaagcggcggt
gggcatcctcacgcgggaggggcacgcatccccgaagaatcctttgaggcttttctccac
gccttcgatgccgggcttggagaagcagaaatgaggtaa
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