Methanosarcina sp. MTP4: MSMTP_0828
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Entry
MSMTP_0828 CDS
T03850
Name
(GenBank) DNA-directed RNA polymerase subunit B'
KO
K03044
DNA-directed RNA polymerase subunit B' [EC:
2.7.7.6
]
Organism
metm
Methanosarcina sp. MTP4
Pathway
metm03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
metm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MSMTP_0828
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
metm03021
]
MSMTP_0828
Enzymes [BR:
metm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MSMTP_0828
Transcription machinery [BR:
metm03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
MSMTP_0828
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
RNA_pol_Rpb2_45
DUF1451
DmmA-like_C
YflT
Motif
Other DBs
NCBI-ProteinID:
AKB24297
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All DBs
Position
1006968..1008782
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AA seq
604 aa
AA seq
DB search
MTKAKIFINGELVGTHDNPAELVEELRKMRRQGFISKQVNIALNDNTREVVISSDMGRAR
RPMVVVENGVPLVTEEQIAKLKNKEIGFEDLVKGGCVEYLDAEEEENAYIALYESQLNSR
HTHMELDPELMLGICTGMVPHPEHNASPRNTMGAAMIKQCIGVSTANQKLRPDTRAHVLH
YPQRAMTRTRTCEAIGFDDRPAGQNFVVAILSYEGYNIEDALIFNNGSIERGLGRSHFLR
TFEGEERRYPGGQEDKFEIPDSEFRGARSADAYANLDIDGLVNPETPVGPNDVLIGKTSP
PRFLEEPSEFGIAVEQRRESSITMRSNEKGIVDTVILTESINGTRLAKVKVRDERIPDIG
DKFASRHGQKGVIGLKVPIADMPFTESGLTPDLMINPHAIPSRMTVGHVLEMIGGKVGSM
EGRRVDATAFSGENEEDLREALKSHGFAHTGKEVFYDGATGRMIPADVFVGVILYQKLHH
MVTSKMHARSRGPVQVLTRQPTEGRAREGGLRFGEMERDVLVGHGAAMSLKERLLDESDK
VVELVCSHCGMIATFDKQRNVSFCAACGADTDIYPVEMSYAFKLLLDEIKSLGVAPRLNL
EDAV
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgactaaagcaaaaatattcatcaacggagagcttgtcggaacccatgacaaccctgcg
gaactggtggaagaactccgaaaaatgaggcgtcagggtttcatctccaagcaggtcaac
atagccctgaacgacaataccagggaagtagtcatcagctccgatatgggcagggccaga
aggcccatggtagttgtggaaaacggggttccactggttacggaagagcagatagcgaaa
ctgaagaataaagaaatcggctttgaggacctggtaaagggaggttgtgtggagtatctg
gacgccgaggaagaggaaaacgcctacattgccctctacgagtcccaacttaactcaagg
catacccacatggaactcgatcccgaactcatgctcgggatctgcacgggaatggtcccg
catccggaacacaacgcttccccgcgtaacacaatgggggcagcgatgatcaagcaatgt
atcggggtttccacggcgaaccagaaactccggcccgatacccgtgcccacgtcctgcac
tatccacagagggcaatgacaaggacaaggacctgtgaagccattggttttgatgacagg
cctgcaggccaaaactttgtggtggcaatcctttcctatgaagggtacaacattgaagat
gcccttattttcaacaacgggtcaattgaaagaggccttggaaggagccacttcctcagg
acatttgagggtgaagagcggagataccccggtggtcaggaagacaagttcgagatcccc
gactccgaattccgtggagctcgcagtgcagatgcctatgcgaacctggacattgacggg
cttgtaaaccccgagacccctgtgggtcctaacgacgtgcttatcggaaagaccagtcct
ccgaggttcctggaagaaccttcggaattcgggattgccgtagagcagcggagagaaagc
tcgattaccatgcggtccaacgaaaagggaatcgtggacactgtcattcttacagaatcc
atcaacgggactcgccttgccaaagtcaaggtcagggacgagaggatcccggatatcggg
gacaagtttgcatcccggcacgggcaaaaaggagttatcggactgaaagtcccgatcgct
gatatgccctttacggaatctggcctgacccccgaccttatgatcaacccgcacgccatt
ccttcccgtatgactgtcgggcacgtgcttgaaatgatcgggggaaaagtcgggtccatg
gaaggcagaagggtggacgctacagccttttccggagaaaatgaagaagacttaagggaa
gctctgaaaagccacggttttgcccataccggtaaagaggtattctacgatggcgcaacc
ggcagaatgatccctgctgatgtctttgttggagtaatcctttatcagaaactgcaccac
atggttacttccaagatgcacgcccgttcccgcggtcccgtgcaggtgcttacccgccag
cccaccgaaggtagggcaagggaaggaggtctgaggttcggagaaatggagcgtgacgtg
ctggtagggcacggggctgccatgtccctgaaagaaaggctgctggacgagtcggacaag
gttgtggaacttgtctgctcccattgcggtatgatagcaacttttgacaagcagaggaac
gtctctttctgtgctgcctgcggggctgacacggatatctatcccgtggagatgagctac
gcattcaaactgttactggacgaaatcaagtccctgggtgttgcacccaggctcaatttg
gaagatgcggtatga
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