Methanosarcina sp. MTP4: MSMTP_0836
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Entry
MSMTP_0836 CDS
T03850
Name
(GenBank) Translation elongation factor 1 alpha subunit
KO
K03231
elongation factor 1-alpha
Organism
metm
Methanosarcina sp. MTP4
Pathway
metm03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
metm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
MSMTP_0836
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
metm03019
]
MSMTP_0836
03016 Transfer RNA biogenesis [BR:
metm03016
]
MSMTP_0836
03012 Translation factors [BR:
metm03012
]
MSMTP_0836
04131 Membrane trafficking [BR:
metm04131
]
MSMTP_0836
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
metm04147
]
MSMTP_0836
Messenger RNA biogenesis [BR:
metm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
MSMTP_0836
Transfer RNA biogenesis [BR:
metm03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
MSMTP_0836
Translation factors [BR:
metm03012
]
Eukaryotic type
Elongation factors
MSMTP_0836
Membrane trafficking [BR:
metm04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
MSMTP_0836
Exosome [BR:
metm04147
]
Exosomal proteins
Proteins found in most exosomes
MSMTP_0836
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Dynamin_N
Ras
FeoB_N
Gtr1_RagA
Motif
Other DBs
NCBI-ProteinID:
AKB24305
UniProt:
A0A0E3NUW4
LinkDB
All DBs
Position
1017173..1018441
Genome browser
AA seq
422 aa
AA seq
DB search
MAAEKPHMNLAVIGHIDHGKSTLVGRLMYEAGAVPAHVIEKYKAEAKEKGKESFAFAWVM
DSLKEERERGITIDIAHKRFDTDKYYFTVVDCPGHRDFVKNMITGASQADAAILVVAAPD
GVMAQTREHIFLSRTLGISQLIIAVNKMDAVNYSEDRYKEVVAQVSELLKMIGFKPKDIP
FIPTSAFEGDNITKASENTPWYKGPGIMQALDQLKQPEKPDTLPLRIPVEDAYTISGIGT
VPVGRVETGVMKKGDKVVFMPGGTEGEVKSIEMHHEEIPQAVPGDNIGWNVRGIGKSDVR
RGDVCGLVSNPPSVADEFVGQIVVLQHPSAITAGYTPVFHAHTSQTACQLISLDKKLDPK
SGQVKEENPTFIKAGDAAIVTIKPTKPMVMEPVKEIPQLGRFAIRDMGMTIAAGMCMSVK
QK
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagaaaaaccacacatgaacttagcagtcattggtcacattgaccacggaaag
tccacccttgtgggtcgcttaatgtatgaagccggtgctgttccggcccacgttatcgag
aaatacaaggcagaagcaaaagagaagggtaaagaatctttcgccttcgcatgggtcatg
gactctctcaaggaagagcgtgaaagaggtatcacaatcgatatcgctcacaagaggttc
gacacagacaagtactactttacagttgtggactgcccaggtcaccgtgacttcgtcaag
aacatgatcaccggtgcctcccaggcagacgcagcaatccttgtggtcgcagctcctgat
ggtgtaatggcccagaccagggaacacatcttcctttccaggacccttggtatcagccag
ctcatcatcgccgtgaacaagatggatgccgtgaactacagtgaagacaggtacaaggaa
gttgtagcccaggtttccgaacttctcaagatgatcggcttcaagccaaaggacattccc
ttcatcccgacctccgctttcgagggcgacaacatcacaaaggccagcgagaacacaccc
tggtacaagggccccggaatcatgcaggccctcgaccagctcaagcagcccgaaaagccg
gacaccctcccgctcaggatccctgtggaagacgcatacaccatctccggtattggtacc
gtgcctgtgggcagggtcgagaccggtgtcatgaagaagggcgacaaggtcgtcttcatg
cctggtggaacagaaggagaagtcaagtccatcgagatgcaccacgaagaaattccgcag
gcagtccccggtgacaacatcggctggaacgtccgtggtatcggcaagagcgacgtccgc
agaggagacgtttgtggtcttgtgagcaatccaccatccgttgctgacgagttcgtgggc
cagatcgtggttctccagcacccctccgcaatcaccgcaggatacacccctgtgttccac
gcccacacttcccagaccgcatgccagctgatttctcttgacaagaagctggaccccaag
agcgggcaggttaaggaagagaacccgaccttcatcaaggccggagacgcagcaatcgtc
acaatcaagccgacaaagccgatggtcatggagcctgtaaaggaaattccgcagctcggc
agattcgccatccgcgacatgggtatgaccattgccgccggtatgtgcatgagtgttaag
cagaaataa
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