Methanosarcina sp. MTP4: MSMTP_0912
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Entry
MSMTP_0912 CDS
T03850
Name
(GenBank) DNA-directed RNA polymerase subunit E'
KO
K03049
DNA-directed RNA polymerase subunit E' [EC:
2.7.7.6
]
Organism
metm
Methanosarcina sp. MTP4
Pathway
metm03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
metm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MSMTP_0912
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
metm03021
]
MSMTP_0912
Enzymes [BR:
metm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MSMTP_0912
Transcription machinery [BR:
metm03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
MSMTP_0912
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHS2_Rpb7-N
S1
DUF826
Motif
Other DBs
NCBI-ProteinID:
AKB24381
UniProt:
A0A0E3L645
LinkDB
All DBs
Position
1116501..1117088
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AA seq
195 aa
AA seq
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MYKMMRLVDTVRIPPTLLGEDVAPTVKNALREKLEGQVDKKLGSLVAVCKIDEIGEGHIL
VGDGAVYYDVTFEAIMFVPELQEIIEGEVVEAVGFGVFVGIGPMDGLLHVSQITDDFISY
DAKNARLVTKGGGKSISEGDHVRGRIVAVSINEREPKESKIGLTMRQTALGKLQWLEEAR
RKKQQNEAAPAEKAA
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atgtataaaatgatgagactcgttgatacggtccgcatacctcccaccctgctcggggaa
gatgtggctcctaccgtaaaaaacgcgttaagggaaaaacttgaggggcaggtcgataag
aaacttggctcccttgtcgcagtatgcaagatcgacgagataggagaagggcatatcctt
gtcggagacggggcggtctactacgacgtgacgtttgaagcaatcatgtttgtccccgaa
cttcaagaaatcattgaaggagaagttgtggaagctgtcggtttcggggtcttcgtaggt
atcgggcccatggacgggctgctccacgtcagccagatcactgatgattttatttcgtat
gatgccaagaacgcaaggcttgtcaccaaaggcggaggcaagtccatttccgagggtgac
catgtaaggggccggatcgtagcggtaagtatcaacgaaagagaaccaaaagaaagcaag
atcgggctaaccatgcgccagactgcgcttggaaaactgcagtggcttgaagaggcccgc
agaaagaagcagcaaaatgaagctgcaccagcagaaaaagctgcctga
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