Methanosarcina sp. MTP4: MSMTP_1200
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Entry
MSMTP_1200 CDS
T03850
Name
(GenBank) tRNA pseudouridine 13 synthase
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
metm
Methanosarcina sp. MTP4
Brite
KEGG Orthology (KO) [BR:
metm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
metm03016
]
MSMTP_1200
Enzymes [BR:
metm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
MSMTP_1200
Transfer RNA biogenesis [BR:
metm03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MSMTP_1200
Prokaryotic type
MSMTP_1200
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AKB24669
UniProt:
A0A0E3NVJ7
LinkDB
All DBs
Position
complement(1546192..1547508)
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AA seq
438 aa
AA seq
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MEVPNIEKQIGISLYSTDSAGLGGQLRQEVEDFIVKEITNREEGTEGKHLVLEVTKRDWD
THHFTRTLAKILKISQKRITVAGTKDKRALTTQKISIFGVDAEAIEKVRLKDVEMKVLGR
SKKSVELGDLTGNEFIITIRNIDLPVDETRTILGKATEEILAAGGVPNFFGIQRFGSVRP
VTHLVGKAIVEGDFEKAAMTYIAEPFPDEPEETKAARQYVKETRDFRTGLDKYPLRMGHE
RAMMNHLIANPDDFAGSFLVLPKNLYRMFAHAYQSCIYNTILCRRIEKGLPLNLAVEGDI
VCFKNEAGLPDSSRTESVTAEKVNAMNRLLKRGRAFITAPLPGHATEFASGVPGEIEQEV
LKEFEVPLEGFNIKEIPEMSSKGIRREVLLNVEPKFEVSEDELNPGKSKAVLEFMLPKGS
YATTVLREYMKANPLQMS
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggaagttcccaatatcgaaaaacagattggaatcagcctttactccacagacagcgca
ggtctcgggggacagctccggcaggaagtggaggacttcatcgtaaaagagatcacgaac
cgggaggaggggactgaaggcaagcacctggtccttgaagtcaccaaacgcgactgggac
acccaccattttacccggacccttgcaaagatcctgaagataagccagaagcggatcacc
gttgcaggtacgaaggacaagcgggcgctgacaacccagaagatcagcatctttggtgtg
gacgcagaggctatcgaaaaggtccgcctgaaagacgtagaaatgaaagtcctgggtcgg
tctaaaaaatccgtggaactcggagacctcaccggaaacgagttcataatcaccatccgg
aatatcgaccttcccgtggatgagacccggaccatccttggaaaagccacggaagagatc
ctggctgccggcggcgtccccaactttttcgggatccagcgctttggctcggtccgcccg
gtcactcatctggtaggaaaagccatagttgaaggcgactttgaaaaagcagccatgacc
tacattgccgagcccttccccgacgagccagaagagacaaaagccgcccgacagtacgta
aaggagaccagggacttcaggaccggccttgataaataccctctccgcatggggcacgaa
cgggcaatgatgaaccaccttatagcaaacccggatgactttgcgggatctttcctggtg
ctcccgaaaaacctctaccgcatgttcgcccacgcttaccagtcctgcatatacaacact
atcctctgccgccggattgaaaagggtctccccctgaaccttgccgtggaaggggatatc
gtctgcttcaaaaacgaagccggactcccggacagttcccggaccgagtcagtcaccgcc
gaaaaggtaaacgcaatgaaccgcctgctcaaacgcggccgcgccttcataacagccccc
ctcccgggccatgccacagaattcgcatccggggtcccgggagagatcgagcaggaagtc
ctgaaagaatttgaagttcctctcgaaggcttcaacatcaaagaaatcccggaaatgagc
tcgaaaggcatccgccgggaagtcctcctgaatgtggaacccaaattcgaggtctcggaa
gacgaactgaaccccggaaaatcaaaggcagtgctggagttcatgctccccaaggggagt
tatgcgacaacggtgctgcgagaatatatgaaagctaacccgctgcagatgagctga
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