Methanosarcina sp. MTP4: MSMTP_1773
Help
Entry
MSMTP_1773 CDS
T03850
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
metm
Methanosarcina sp. MTP4
Brite
KEGG Orthology (KO) [BR:
metm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
metm03032
]
MSMTP_1773
03400 DNA repair and recombination proteins [BR:
metm03400
]
MSMTP_1773
Enzymes [BR:
metm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MSMTP_1773
DNA replication proteins [BR:
metm03032
]
Prokaryotic type
DNA Topoisomerases
MSMTP_1773
DNA repair and recombination proteins [BR:
metm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MSMTP_1773
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
HHH_5
DNA_pol_lambd_f
RAD51D_N
DUF4332
Cdd1
IMS_HHH
Peptidase_C48
MCM_OB
SAM_BAF
IMS_HHH_1
Calmod_bind_M
RNA_pol_A_CTD
Zn_ribbon_recom
Motif
Other DBs
NCBI-ProteinID:
AKB25242
UniProt:
A0A0E3NXE9
LinkDB
All DBs
Position
2329462..2331717
Genome browser
AA seq
751 aa
AA seq
DB search
MHLIVTEKNIAARRIAAILAPKSPKKERVSGVDTYQYEIVTGKNKQETIVIGLSGHIVGI
DFPKEYNNWQKVDAKDLIGADIITTPINRKIVAALRKLGKEAGKVTIATDYDREGELIGV
EALNIIKKVSPDIGFDRVRYSAITPKAIEDAFSNPTPVDFNLADAGHSRQVIDLVWGAAL
TRYISLAAGRLGRMFLSVGRVQSPTLSLIVDREKEREAFVSTPYWEIHAELENGKKETFP
AQHATRRFLEKEEADRVFAKLGKKATVQEIERGNRLDQPPTPFNTTGFISAANAIGLTPS
NAMRIAESLYTNGYISYPRTDNTVYPETLDLRAQIEIFTEGPFQEYANALLAKKELKPTR
GKKETTDHPPIYPASLAKESELKEDEWKVYGLVVRRFFATFAEPSEWETLRIKLDINEEE
FKASGARLVVPGWRWYYDYNKPEDRLLPELSEGETLKVAKKEMLDKETQPPGRYGQGRLI
NMMEELGLGTKATRHEIISKLYSRAYIHGTQVQPTKTSFAVMDTLEKYSPTITKPDMTQI
LEENMDRIAEGKISEAEVLEESREMLKEVFSELEKNRDKVVESLQAGLREDKIIGNCPDC
GNEIMVRRSKRGGRFIGCSNYPDCTFSLPLPRSGQIVVTDKICKEHGIHHLRIVNYGKRP
WDLGCPQCNFIEWQKAKQEEQDKIPDQERPKSIKEINGVGKVTAEKLGEAGISTVEDLIK
ANPFELAKVTNISIKKIKNWQVTCGAAIESC
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgcatcttatcgtaacggaaaagaatatcgcggcgaggaggatagccgcaatcctggca
ccgaaaagccctaaaaaagaaagggtcagcggagtggatacctaccagtacgaaatagtt
accggcaagaataagcaggaaactattgtcatcgggctttccgggcacatagtcgggatt
gattttccaaaggaatacaacaactggcagaaggtcgatgcaaaagacctgataggtgcc
gacatcataacgactcccattaacaggaagatcgtggccgccctgaggaagctcgggaaa
gaagccggaaaggttacaattgccactgactatgaccgggaaggggaactgatcggagtc
gaagctctcaatatcataaaaaaggtgagccctgacatcggttttgacagggtccgctac
agcgccattaccccgaaagccattgaagatgcattttcaaaccctactcctgtggacttc
aacctagcagatgccgggcattccaggcaggtcatcgacctggtctggggtgcagccctg
acccgctacatatcccttgccgcaggcaggctcgggaggatgttcctgtccgtaggcagg
gtccagtccccaaccctctccctgatcgtggacagggaaaaagagagggaagcctttgtc
tccaccccttactgggaaatccatgccgaactcgaaaacggcaaaaaagaaacttttccc
gcccagcacgcgacccggcgcttcctggagaaagaggaagctgacagggtctttgcaaaa
cttggaaaaaaggcaaccgtgcaggaaatagaaaggggaaaccggctcgaccagccccct
actccatttaataccacgggcttcatcagcgctgcaaacgcaatagggcttactccctca
aacgctatgcgcatagccgaatccctctatacaaacgggtacatctcatatcccaggacc
gacaacacagtctatcccgaaaccctggacctcagggcccagatcgaaattttcacggaa
gggcccttccaggagtacgcaaacgccttgctggcgaaaaaggagctcaagcccacccgt
gggaaaaaggaaactaccgaccaccccccgatttacccggcttcccttgcaaaggaatcg
gagctgaaagaggacgaatggaaggtctacggactggtggtcaggcgcttttttgcaacc
tttgccgagcccagcgaatgggagaccctgcgcataaagcttgacataaacgaagaagag
ttcaaggcaagcggggcaaggcttgttgtccctggctggagatggtactacgactacaac
aagcccgaagacaggctgctccctgaactttcggaaggggaaaccctgaaagtggcaaag
aaggagatgctcgacaaggagacccagcctcccggtcgctacgggcaggggcgcctgatc
aacatgatggaagagctcgggctcgggacgaaagccaccaggcacgagatcatcagcaag
ctctattccagggcttatatccacgggacccaggtccagcccacgaagacctcttttgcc
gtcatggatacccttgagaaatattccccgacgatcaccaaacccgacatgacccagatc
cttgaggaaaacatggacaggatcgccgaaggtaagatctcggaagccgaagtccttgag
gaatcgagagagatgttaaaagaggtcttttcggaactggaaaagaaccgggacaaagtt
gtggaatccctgcaggcagggctccgggaagacaagatcatcggtaactgtcctgactgc
ggaaacgagataatggtccgccgttctaagcggggaggccgtttcataggctgcagtaac
tacccggactgcactttttccctgcccctgcccaggagcgggcagattgtggttacggat
aagatttgcaaggagcacggaatacaccacctccgcatagtcaattatggaaaacgcccc
tgggaccttggctgtccccagtgcaatttcattgaatggcagaaggcaaaacaggaagaa
caggacaaaatccccgatcaagaacgcccgaaatccatcaaggaaatcaacggggtcggg
aaggttacggcagaaaaactcggggaagcggggatctcaaccgtcgaagacctgatcaaa
gccaatcctttcgaacttgcgaaagttaccaatatcagcataaagaagatcaaaaactgg
caggtaacctgcggggcagctattgaaagctgctga
DBGET
integrated database retrieval system
