Methanosarcina sp. MTP4: MSMTP_2048
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Entry
MSMTP_2048 CDS
T03850
Name
(GenBank) Cell surface protein
Organism
metm
Methanosarcina sp. MTP4
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Gene cluster
GFIT
Motif
Pfam:
NosD
Beta_helix
Pect-lyase_RHGA_epim
Pectinesterase
Motif
Other DBs
NCBI-ProteinID:
AKB25517
UniProt:
A0A0E3NY50
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Position
2696417..2701708
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AA seq
1763 aa
AA seq
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MWKIERIVILFFALMLAINLTITGNVAAETFSVDDDGPANFTTIQEALNNASSEDEIVVK
SGTYMENVDVNKDNITIRSESGNPFDTVVKADSSSDHVFHVTADEVKISGFNITGASGTE
RAGIYLEGVEYCLIENNTLSKNDYGIFLRSSSNNTLSNNTADSNTNDGISLYSSSSNTLS
NNTADSNNEEGIALCYSSNDNTLENNTASNNSYGIYLTFSGSSILSGNWMQDNRYNFYAD
GELDPNVVYTNNSVDGKPIYYLVEASDLEINSSSNAGTVHLIDCKNITVKDLTIEKTGNG
IYLRNTTDSKLENNTASNNYLGIYLSSSSGNTLTSNNVSANGDGIGIYLSYSSNNTLSNN
TASNNFLGIYLYVSSSNTLSNNIASNNEYGIDLESSSSNTLSNNIASNNACGIDLACSSS
NTLSNNKALNNTNGIWLVYSSSNTLSNNTASNNDDGIHLRDSSNSNTLESNTANLNNDRG
IFLNFSSNNTLSNNTASNNDDGIHLWYSSNNNTLSNNIASNNIEYGIYLRDSSNNFIYNN
YFNNTNNAYFEGTNTGNLWNTTEKVWYTYDDNPHYGYLGNYFSDYSGSDTSGDGVGEAPY
FLDFDNADDYPLVALPFEILPSHVRNTDSGKEFPTIQTAIDDPDTQDGDTVLVYPGTYME
NVDVDKANIKIMSESGNPFDTIVQAASSSDHVFYVTADGVKISGFSITGASGTNCAGIYL
ETVLDCLIENNAASNNSRGICLSFSSGNTLENNAASNNDYGICLQVSDYNILSGNLMQDN
TYNFYADCGALSAGNENIVYANNRVDGKNIYYLLEVSDLEINSYSNAGTVYLINCKNITV
KDLKIEKSGNGIYLYNTTDSKLENNSIMENHFGIHLAASDSNKLSNNAASNNEYGIFLDA
SCRNTLENNTASNNNDGIYLEFSSSNKLSNNTASNNQYGIFLRDSNYNSIYNNYFSNTNN
ALFSGTNTGNIWNTAKTPGSNIVGGPYLGGNYWAKPDGSEWSQTTPDSDMDGFCDLQYST
GNGPDSLPLALWAPVKNVNSGELFWTIQAAVNAASPGDTITVYPGTYTENVDVDRANITI
KSYSGNFFDTIVQAASSSDHVFSVKADGVKISGFSITGANDSECGIYLGGFEYCLIENNE
LSNNFFGIWLPSSSNNTLNNNTVSNNFFGIALSHSSNNNILSNNTASDNGSGIWLDSSSN
NTLENNTVDLNRGMGIYLWNPSDNNKLINNKLINNTVTNNEYGIWLDSSNSSILSGNLMQ
DNTCNFYTGYGHMDTNIIHSNNTIDGKPIYYLVKVSDIEINSSSNAGTVYLIDCINITVK
DLKIEKTGTGIYLYNTTDSKLENNSIMETYEGIYLESSSDNLIYNNYFNNNNNVFLSGTN
TGNIWNTTKTAGSNIIGGPYLGGNFWATPTEDGFSQIHDDTDGDGICDLDYDLGGGNIDY
LPLLIPSPYKPEDPSKPQVVDGGDNGGEEEEVVEEEVVEEEVVEEEVVEEEVVEEEVVEE
EVVEEEVVEEDEVDEEDEVDEVDEEEVVEEEVVEEVNSTYIIEKITEDLQEDITVKYEFQ
EQENCIEDISFNPGKTEDNVTAEVKILEDIPPEVLAPPKGIVYKGMKIQVGNAEFSSDEK
NFENVTIKFRVEKSWIQENNINESTIVMRRYSEGKWEDLNTSLLNTSKVSNATIEENNIS
EDNIHLERYSVGIWELLKTPKVNDYDDYIYFVAETPGFSWFEIFGKVLPDGLTNQGPILP
AAFLLIICLGKFFVSREKDQDEK
NT seq
5292 nt
NT seq
+upstream
nt +downstream
nt
atgtggaagatagaaagaatcgttatactcttttttgcattgatgcttgcaatcaacctg
acaatcacaggcaatgtagctgctgaaacgttttctgtggatgacgacggaccggcaaat
ttcacgacaattcaagaagccctgaataacgcaagttccgaagatgaaatcgtcgtcaaa
tcaggcacgtatatggaaaatgtagacgtgaataaagataacataacaataagatccgaa
tccggaaaccctttcgacactgtagttaaggcagacagtagctcagaccacgtttttcat
gttacggcagacgaagtaaaaattagcgggtttaacataacgggagccagtggcaccgag
cgcgccggaatctaccttgaaggagttgaatattgccttattgaaaataacacattatcg
aaaaacgactacggcatctttctgaggtcttcgagcaacaacacgctttctaataacacc
gcggactcgaacaccaacgacggcatctctctttattcttcgagcagcaacacgctttct
aataacaccgcggactcgaacaacgaggaaggcattgctctttgttattcgagcaacgat
aacacgcttgaaaataacaccgcatcgaacaactcctacggcatctatttgactttttct
ggcagcagtattctttccggaaactggatgcaggacaacaggtacaatttctacgcagat
ggtgaactggatcccaacgttgtctatactaataacagtgtagatgggaagccaatttat
tatcttgttgaggcttcagatcttgaaatcaattcatcttcaaatgcagggactgttcac
ctgattgactgcaaaaatatcactgttaaagacctgactattgaaaagacagggaacgga
atataccttcgtaacaccacggattcgaaactggaaaataacaccgcatcgaacaactac
ttaggcatctatctgtcttcttccagcggcaacacgctgaccagcaacaatgtatcggcc
aacggggacggcatcggtatatatctgtcttattcgagcaacaacacgctttcaaacaat
accgcatcgaacaacttcctaggcatctatctctatgtttcgagcagcaacacgctttct
aataacatagcatcgaacaacgagtacggcatcgatctggaatcttcgagcagcaacacg
ctttctaataacatagcatcgaacaacgcctgcggcatcgatctggcctgttcaagcagc
aacacgctttctaataacaaagcattgaacaacaccaatggcatctggctggtttattcg
agcagcaacacgctttctaataacaccgcatcgaacaacgacgacggcatccatctgaga
gattcgagcaactctaatacgcttgaaagtaacacagcaaacttgaacaacgatcgcggc
atctttctgaatttttcgagcaacaacacgctttctaataacaccgcatcgaacaacgac
gacggcatccatctatggtattccagtaacaacaatacactcagcaataacatagcatca
aacaacatcgagtacggcatttatctaagggattccagcaataatttcatctacaacaac
tatttcaacaatactaataacgcttattttgaaggtacaaacaccggtaacttatggaac
accacggaaaaggtctggtatacctacgacgacaacccgcattacgggtatcttggaaac
tatttctccgactactctggatccgatacttctggagatggggtgggagaagccccttac
tttcttgattttgacaatgcagacgattatccactggttgcattgccttttgaaattctg
ccatcccacgtaagaaacacagattcaggaaaagaattcccgacaatccagacagctata
gatgacccggatacacaagatggtgatactgtccttgtttaccccgggacttatatggaa
aatgtagacgtggataaagctaacataaaaataatgtccgaatccggaaaccctttcgac
actatagttcaggcagccagtagctcagaccacgttttttatgttacggcagacggagta
aaaattagcgggtttagcataacgggagccagtggcaccaattgtgccggaatctacctt
gaaacagttctagattgccttattgaaaataacgcagcgtcgaacaactctcgcggcatc
tgtctttctttttcgagtggcaacacgcttgaaaataacgcagcatcgaacaacgattac
ggcatctgtctgcaagtatcggactacaatattctttccggaaatctaatgcaggacaac
acgtataatttctacgcagattgtggagctctgagtgcaggtaatgaaaatattgtctat
gctaataacagagtagacggaaagaatatttattatcttttagaggtttcagatcttgaa
atcaattcatattcaaatgcagggactgtctacctgattaactgtaaaaatatcactgtt
aaagaccttaagatcgaaaagtcagggaatggaatatacctttacaataccacggattca
aaactggagaataacagtataatggaaaatcactttggcatccatctggctgcttcagac
agcaacaagctttcaaacaatgccgcatcgaacaacgagtacggcatctttctggatgct
tcgtgcagaaacacgcttgaaaataacaccgcatcgaataacaacgatggtatctatctg
gagttttcgagtagcaacaagctttcaaacaataccgcatcgaacaaccaatatggcata
tttctaagggattccaactacaattccatctacaacaactatttcagcaacactaataac
gctttattctcaggcacaaacaccggcaacatctggaacactgcaaaaacccccggctca
aatatcgttggcggcccatacctcggaggcaattactgggcaaaacccgacggtagcgaa
tggagccagacaactccagattcagacatggatggtttctgtgatttgcagtactccaca
ggaaatggcccggattccctcccgcttgccctgtgggctcctgtcaagaacgtaaactca
ggagaactcttctggactatccaggctgcagtaaatgctgcaagccccggagacaccatc
accgtttaccccgggacttatacggaaaatgtagacgtggatagagctaacataacaata
aaatcctactcaggaaactttttcgacactatagttcaggcagccagtagctcagaccac
gttttttccgttaaggcagacggagtgaaaattagcgggtttagcataacgggagccaat
gactcggaatgcggaatctaccttggcggatttgaatattgccttattgaaaataacgaa
ttatcgaacaacttcttcggcatctggctgccttcttcgagtaacaacacgctgaacaac
aacacagtatcgaacaacttcttcggcatcgcgctgtctcattcgagcaacaacaacatt
ctttcaaacaatacagcatcggataacggaagtggaatctggctggattcttcgagcaac
aatacgcttgaaaataacacagtggatttgaatagaggaatgggcatctatctatggaat
cccagcgacaacaacaaacttatcaacaacaaacttatcaataacacagtaactaacaac
gaatatggcatctggctggattcttcgaacagcagtattctatccggaaacctgatgcag
gacaacacatgtaatttttacacagggtatggacatatggataccaatattatccatagc
aataacaccatagatggaaaaccaatttattatcttgttaaagtttcagatattgagatc
aattcatcttcaaatgcagggactgtctacttgattgactgtataaatataactgttaaa
gacctgaagatcgagaaaacaggtacaggaatatacctttacaataccacggactcgaaa
ctggaaaacaacagtataatggaaacttacgagggcatctatctagaatcttccagcgac
aatttaatctacaacaactacttcaacaataataataacgtttttttatcaggaacaaac
accggcaacatctggaacacgaccaaaaccgcaggctcaaacatcatcggcggcccctac
cttggtggaaacttctgggcaacaccaaccgaggacggcttcagccagatccacgatgac
accgatggagatggcatttgtgatctagattatgacctgggtggagggaacattgattat
ctgcctcttctcatcccttcaccctacaagcctgaggacccgtcaaaaccccaagtagtt
gatggtggtgataacggaggtgaagaagaagaagtagttgaagaagaagtagttgaagaa
gaagtagttgaagaagaagtagttgaagaagaagtagttgaagaagaagtagttgaagaa
gaagtagttgaagaagaagtagttgaagaagacgaagtagatgaagaagacgaagtagat
gaagtagatgaagaagaagtagttgaagaagaagtagttgaagaagtaaactcaacttac
attattgaaaaaattactgaggatttacaagaagatatcactgtaaaatatgagtttcaa
gagcaggaaaactgtattgaagacatttccttcaaccctggaaagactgaggacaacgtg
accgctgaagtgaagatacttgaagacatcccccctgaggttttagccccacctaagggt
atcgtctacaaaggaatgaagattcaggtaggtaatgctgaattttcgagtgacgagaaa
aacttcgagaatgtaacaatcaagttcagggttgaaaagagctggattcaagaaaacaac
attaatgaatccacaatcgttatgcgcaggtattcagagggaaaatgggaagatcttaac
acttcccttcttaacacttcaaaggtcagcaatgcaacgattgaagaaaacaacattagc
gaagacaatatccatttggaaaggtattcagtgggaatatgggaacttcttaaaactcca
aaagtcaatgattatgatgattatatctattttgtggctgaaactccaggtttctcttgg
tttgaaatctttggaaaggtactaccggatgggctaacgaatcagggtcccattttgccg
gcagcgtttcttttaataatttgtctcggaaaattttttgtgtcaagagaaaaggatcaa
gatgaaaaataa
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integrated database retrieval system