KEGG   Methanosarcina sp. MTP4: MSMTP_2117
Entry
MSMTP_2117        CDS       T03850                                 
Name
(GenBank) CRISPR-associated protein, Csh1 family
  KO
K19114  CRISPR-associated protein Csh1
Organism
metm  Methanosarcina sp. MTP4
Brite
KEGG Orthology (KO) [BR:metm00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:metm02048]
    MSMTP_2117
Prokaryotic defense system [BR:metm02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-B factors
    MSMTP_2117
SSDB
Motif
Pfam: Cas_TM1802_C Cas_TM1802_M Cas_TM1802 ViaA_N
Other DBs
NCBI-ProteinID: AKB25586
LinkDB
Position
2785997..2787850
AA seq 617 aa
MKEIGEYALEKENKDLNDFVSILVENPASNETYKHVFCIKFASSQDNFKFKGIEHQEYSK
EKIAKYLYKRGSSNGPDITPTARVTEIKKTFSNKIIGWFSKPLKEAKPILDGEEVQFLEL
LGKCIKGNEDIILSELEPKVNSIDAKENSILTLVLEENGFIRYVGDFEVFRKILKNNGAS
KFYRKYDIISRDDDKVCSVCKTHKEVYGFVTPYEFYTVDKRGFVSGGFDQSKAWRNNPIC
LECALKIKVGKEYIEKYMSFGFYGFNFLLIPKLLNKSAKEAIFDVFENFNEKKFAFNKEY
ENFLQANENDILEILSETNDYLNFNFQFYEKSNSSYRILLYIEGVRPSRLRELFKSKGIV
DKRKIFSNYFSNDTETKSIQFTLGNVRCFFPNTPDDPDTNKYFLEVANGIFTGTSIDYNF
LLKYIMQRIRKDFRKENPIRYSLFQGFQMLDFLSQLHLLGNYNGGKCVNSKNLSVLLDDI
APKENSGYEERTNIIFSEFESFFNTDAKKAIFLEGTLVQYLLNIQKSQRGSTPFRTKLRG
LNLDERYVKRIFPEIINKLEEYDSNYYKELENLISKYMIQSGTDWKMPNDEISFYFVLGM
NMSNLLKPPKSEKEVKK
NT seq 1854 nt   +upstreamnt  +downstreamnt
atgaaagaaattggtgaatatgcgctcgaaaaagaaaataaggatttaaacgatttcgta
tcaattttagttgagaatcctgcaagcaatgaaacttataagcatgtattctgcatcaag
tttgcttctagccaagataattttaagtttaaaggaattgaacatcaggagtattcaaaa
gaaaaaattgcaaaatatctctacaagagagggtcatctaatggtccagacatcactcct
actgcaagagtcacagaaatcaaaaaaactttttctaacaagatcataggctggttctca
aagcctttgaaagaagcaaaacctatattggatggcgaagaagtacaatttttggagctt
cttggaaagtgtataaaaggaaatgaagatataatactttcggagcttgaacctaaagta
aactcgatcgatgcaaaggaaaattcgatattaaccttagttcttgaagaaaatggcttc
atcagatatgttggagattttgaggtatttcgaaaaatccttaaaaataatggggcttct
aaattttaccgcaaatatgatattatctctagagatgatgataaagtatgttcggtttgc
aaaacacataaagaagtttatggtttcgttacaccttatgaattttataccgtagataaa
cgggggtttgttagcggggggtttgaccaaagtaaggcatggagaaacaatcccatttgc
cttgaatgcgccttgaaaatcaaagtgggaaaagaatatattgagaaatacatgtctttt
ggtttttatggattcaattttctccttatcccaaagttacttaataagagtgcaaaagaa
gctattttcgatgtttttgagaatttcaatgagaaaaaatttgcttttaataaggaatat
gaaaatttcttacaggctaatgaaaacgatatccttgaaattctaagtgaaacgaacgat
tatcttaattttaattttcaattttatgaaaaatccaattcttcatatcgaattcttttg
tatatagagggggttcgaccttcaaggctaagagaacttttcaaatccaaaggaatagtt
gacaagagaaaaatattcagtaactatttctctaatgatactgaaacaaaatcaattcaa
ttcacattaggtaatgtaaggtgttttttcccgaatactccagatgaccctgatacaaac
aaatattttttagaagttgcaaatgggatatttacgggaacatcaattgattacaatttt
ttattaaagtatataatgcagcgtattagaaaagatttcaggaaggaaaatcccattagg
tattcactatttcaagggttccaaatgttagatttcttaagtcagctgcatttgcttggg
aattataatggaggtaaatgtgtgaattctaagaatttatcggttttattagatgatata
gcaccaaaggaaaacagtggttacgaggaacggacaaatattatcttttcggaatttgaa
tcctttttcaatactgacgcaaagaaggctatttttttagaaggtacactggtccagtat
ctactaaatattcaaaaaagccagcgtggaagcactcctttcagaacaaaacttcgaggc
ctgaatcttgatgagcgttatgtgaaaaggatcttccctgaaatcataaataaactagaa
gagtatgattcaaattattataaagaactcgaaaatctgatctctaaatacatgattcaa
tcaggcactgattggaaaatgccaaacgatgaaatcagtttttattttgttttaggtatg
aatatgtcaaaccttttaaagccacctaaatctgagaaggaggtaaaaaaatga

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