KEGG   Methanosarcina sp. MTP4: MSMTP_2367
Entry
MSMTP_2367        CDS       T03850                                 
Name
(GenBank) Cell division protein FtsH
  KO
K13525  transitional endoplasmic reticulum ATPase
Organism
metm  Methanosarcina sp. MTP4
Pathway
metm04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:metm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    MSMTP_2367
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:metm03019]
    MSMTP_2367
   03009 Ribosome biogenesis [BR:metm03009]
    MSMTP_2367
   04131 Membrane trafficking [BR:metm04131]
    MSMTP_2367
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:metm04147]
    MSMTP_2367
Messenger RNA biogenesis [BR:metm03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     MSMTP_2367
Ribosome biogenesis [BR:metm03009]
 Eukaryotic type
  Pre-60S particles
   Ribosome quality control proteins
    MSMTP_2367
Membrane trafficking [BR:metm04131]
 SNARE
  SNARE associated proteins
   Others
    MSMTP_2367
 Autophagy
  Aggrephagy
   Other aggrephagy associated proteins
    MSMTP_2367
Exosome [BR:metm04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   MSMTP_2367
SSDB
Motif
Pfam: AAA AAA_lid_3 CDC48_N RuvB_N CDC48_2 AAA_5 AAA_16 TIP49 AAA_22 AAA_2 AAA_14 AAA_25 AAA_7 IstB_IS21 AAA_33 AAA_18 nSTAND3 AAA_28 Mg_chelatase RNA_helicase NPHP3_N Sigma54_activat ATPase Parvo_NS1 AAA_17 DUF5906 Zeta_toxin AAA_24 SLFN-g3_helicase bpMoxR PhoH DUF815 ABC_tran AAA_19 NB-ARC ATPase_2 AAA_lid_PRS2_C ResIII
Other DBs
NCBI-ProteinID: AKB25836
UniProt: A0A0E3L6Y6
LinkDB
Position
3114538..3116919
AA seq 793 aa
MEEIQLKVEKAYPIDLGRGIIRLDPTALLKLQLSPGDIVEIRGKKMTTAKVWRADRQDWE
QGIVRIDNFIRQNAGVGIGERVSIKKVEAPEAKKVILALPESMTQAGGPELQFGEHANEI
IKRHILKRPVFKGDIIPIINSMTHPMTESLTTSQVIPLVAVETDPANAIVLITESTRIEL
RKKPVQGYETVARGVTYEDIGGLGQEIMRVREMIELPMKHPELFHHLNIEPPKGVILYGP
PGTGKTLIAKAVANESGASFHYIAGPEIVGKFYGESEERLRKIFEEATQEAPSVIFIDEI
DSIAPKRENVTGEVERRVVAQLLTLMDGMEERGQVVVIGATNRVDAIDPALRRPGRFDRE
IHIGVPDTNDRYEILQIHTRGMPIESDEDPVETGIETEAEVAEVAEVAGKPETEAGVEEV
SAEVLRKEKQVNKYLTYLAERTQGFVGADLLALVQEAAMRCLRENLPDLDLEKEAIPPER
LEKIVVTKNNFEEALMETEPSALREIFVEIPTVTWDNVGGLDEAKQAIIESVEWPIKHPQ
KFLKMGIKAPKGILLYGPPGTGKTLIAQAVSRECNANFISVKGPEMFSKWLGESEKAIRE
TFKKARQVAPCVIFFDEIDSIASMPGMESTDSKTSERVLNQILTEMDGLEALKDVVVIAA
TNRPNLLDPAILRPGRFDRLVYMGSPNRKGRLKIFGIHTRGIPLASDVNLDTLADETEGY
VGADIEAVCREAVMRALRENFDIEEIEMRHFREGLKKVKPTITENIAQYYEKIEEQFKGG
TKPAEPSAYIGYR
NT seq 2382 nt   +upstreamnt  +downstreamnt
atggaagaaatacagttaaaggttgaaaaggcatatcctatcgatctcggaaggggaata
atccggcttgacccaacagcacttttgaagcttcagctctctcccggtgacattgttgaa
atcagggggaagaaaatgaccaccgcgaaagtctggagagcggaccgccaggactgggag
cagggaatcgtccgcattgacaattttatacggcaaaacgcgggagtcggaatcggggaa
agggtcagcatcaaaaaggtagaagccccggaagcaaaaaaggttatcctggcgcttccg
gaaagcatgacccaggcagggggacctgaactgcagttcggggagcacgcaaacgagatc
ataaagcggcatatcctgaaaagaccggttttcaagggcgacatcattcctatcatcaac
tcgatgacccatcctatgaccgagtccctgaccacaagccaggtaatcccgctcgtagcg
gttgaaacggatcctgcaaacgcaatcgtcctgatcaccgagtccaccaggatcgaactc
aggaaaaaacccgtgcagggctacgaaacggttgccaggggagtcacctatgaagatatc
ggagggctcgggcaagagataatgcgcgtcagggaaatgatcgagcttcccatgaaacac
ccggaactcttccaccacctgaacatcgagcctccaaaaggggtcatcctttacggtccc
ccagggaccggaaagaccctgatcgcaaaagccgtggcaaacgaatcgggtgccagcttc
cactacatcgcaggcccggaaattgtcgggaagttctacggggaaagcgaggagaggctc
cggaagatctttgaggaggcaacccaggaagccccgtcagtcatattcatcgatgaaatc
gattccattgccccgaaaagggaaaacgtaacaggggaagtggaaagaagagtcgtcgcc
cagcttctgaccctcatggacgggatggaagagcggggacaggttgtcgtgatcggggct
acgaaccgtgtagatgccattgacccggcactccgcaggcccgggcgctttgacagggaa
atccatatcggggtcccggacaccaacgacaggtacgagatcctgcagattcacaccagg
ggaatgcctattgaaagtgacgaggatcccgtggaaacaggaattgaaaccgaagccgaa
gtagccgaagtagccgaagtagctggaaaacccgaaacagaggcaggggttgaagaggtt
tccgcagaagtcctcaggaaagaaaaacaggtaaacaaatacctgacgtatcttgcagag
cggacccagggttttgtgggcgcggacctgctagcccttgtccaggaagctgccatgcgc
tgcctcagggaaaaccttccggacctggatctggaaaaagaagccatacctcccgagaga
ctggaaaaaatagtggtaaccaagaataacttcgaagaggccctgatggaaaccgagcct
tcggccctgagggaaatctttgtggagataccaaccgtaacctgggacaatgtgggaggg
ctcgacgaagccaaacaggcaatcattgaatccgtggaatggcctattaaacacccgcaa
aaattccttaaaatgggcataaaagcccccaagggaatcctgctctacgggcccccggga
accggaaagaccctgatcgcccaggccgtttccagggaatgtaacgccaacttcatcagc
gtcaaaggcccggaaatgttctcaaagtggctcggagaatcggaaaaagcgataagggag
actttcaagaaagccaggcaggttgccccctgcgtgatcttctttgatgaaatcgactcc
atcgcttccatgccagggatggaatccacggacagcaagacttcagaaagagtccttaac
cagatcctcaccgagatggacgggctcgaagccttgaaagacgtggttgtaatcgccgca
accaaccgcccaaacctgttggatccggcaatcctgaggccggggcgctttgataggctg
gtctatatgggttcacccaaccggaaaggcaggctcaagatcttcgggattcataccaga
gggataccccttgcatcagacgtaaaccttgatacccttgctgacgaaaccgaagggtat
gtgggtgctgacatagaagcggtgtgtagagaagcggtaatgcgggcgcttcgcgagaat
ttcgatattgaagaaatcgagatgagacacttcagggaaggtcttaagaaggtaaagccc
acgatcacggagaacatcgcccagtattatgagaagattgaagaacagtttaagggcggt
acgaaacctgccgaaccaagtgcttatataggatataggtaa

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