Methanosarcina sp. MTP4: MSMTP_2384
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Entry
MSMTP_2384 CDS
T03850
Name
(GenBank) 8-oxoguanine DNA glycosylase
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
metm
Methanosarcina sp. MTP4
Pathway
metm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
metm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MSMTP_2384
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
metm03400
]
MSMTP_2384
Enzymes [BR:
metm01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
MSMTP_2384
DNA repair and recombination proteins [BR:
metm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MSMTP_2384
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
AKB25853
UniProt:
A0A0E3P0T1
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All DBs
Position
complement(3132587..3133435)
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AA seq
282 aa
AA seq
DB search
MYRLKPELFDLNYTLDCGQVFRWNREGDWWTGVVGGQVIRLSQEEACGEILIDSKFSPEF
FVNYFRLDDDLHSIYRSVNKDLLIDRAIKRYCGLRLIRQDPWECLISYMLATASSIPTIQ
KRIYLLSRFFGEELEDGYYSFPDPAALANADLSLLDKCKLGFRTERIKAAAEEVLSGELD
FDILYRLEYKYARERLMRLRGIGEKVSDCILLFAFEKMEAFPVDTHIRQIIQHYHIDDEY
FENCKNLSRMGDWGREYFGPYCGYAQQYLFYQKRVEGFVPLF
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgtacaggcttaagcccgagctgttcgacctgaactataccctggactgcgggcaggtc
ttccgctggaaccgggaaggggactggtggacgggtgttgtgggaggacaggttatccgc
ctctcccaggaagaagcctgcggggaaattctcatagactcgaagttttcacctgagttt
tttgtgaattattttcgtctggatgacgacctacattcgatctacagaagcgttaacaaa
gacctgctcatcgacagggcgatcaaaaggtactgcggacttcgcctgatcaggcaggac
ccctgggaatgcctgatttcctacatgcttgccacggcgtcgagtatccccacgatccag
aaaaggatctacctcctgagcaggtttttcggggaagaacttgaagacgggtattacagt
ttccctgacccggcagctcttgcaaatgccgacctctccctgcttgataaatgcaaactg
gggttcaggaccgagaggataaaagccgctgccgaggaggtgctttccggggaactggac
tttgacatcctttacaggcttgaatacaaatatgcccgggagcggttgatgaggctccgg
ggcatcggggaaaaggtttcggattgtatcctgctttttgcctttgaaaaaatggaagct
ttccccgtggatacccacatccggcagatcatccagcactaccacattgatgacgagtac
tttgaaaactgtaagaatctgagccggatgggggactggggcagggaatatttcgggcct
tattgcggttacgcccagcagtaccttttctaccagaagagggtcgagggttttgttccc
cttttttga
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