Methanosarcina sp. MTP4: MSMTP_2420
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Entry
MSMTP_2420 CDS
T03850
Name
(GenBank) (dimethylallyl)adenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
metm
Methanosarcina sp. MTP4
Brite
KEGG Orthology (KO) [BR:
metm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
metm03016
]
MSMTP_2420
Enzymes [BR:
metm01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
MSMTP_2420
Transfer RNA biogenesis [BR:
metm03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
MSMTP_2420
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
M20_dimer
Motif
Other DBs
NCBI-ProteinID:
AKB25889
UniProt:
A0A0E3NY25
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Position
complement(3179456..3180760)
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AA seq
434 aa
AA seq
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MKVFLESFGCSASLASAEIMKATVERLGHELLESGSADEAEVYICNSCTVKYTTEQKILY
KIRTMGEQGMEVIVSGCMPEVQLEDILHVNPEAHILGINAVSRLGDLLSTLESRKKTGIP
AERLEIRTPDPVGFLSVPHKRSNPNIHICQISQGCNFACSYCIVRHARGKLRSFPPEAIV
EDIRAAVAEGCREVWLTSQDDSQYGMDTGFKLPELLRLISEIPGDFKVRVGMMNPFSVLP
ILDDLVDAFDSDKIFKLLHIPIQSASHSVLKRMNRLHRMENVDIIITKFRDRFEDLSLFT
DIIVGFCDESDEDFKETVTWVEKYCPEKVNISRYSPRPHTKAFSFRNLDSRISVQRSHTL
HKVCEQIKLESKKEMLGWKGRVFVSKYTSIGDVLARTDSYRPVVISGSDLKPGQYAEVEI
TDATPGYFLGKLIR
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtatttcttgaaagttttggctgttctgcaagcctggcttcggccgagatcatg
aaggcaactgtggagaggcttgggcatgagctgctggagtcagggtcggctgatgaggca
gaggtctatatctgcaattcctgtacggtcaagtacaccaccgagcagaagatcctctat
aaaatcaggaccatgggcgagcagggcatggaagtcatcgtttccggctgcatgcccgag
gtccagttagaagacattctgcacgtcaaccccgaggcccacatcctggggataaacgcg
gtttcccgccttggcgacctgctctctacccttgaatcaaggaaaaagacaggaatcccg
gcagagaggcttgaaatcaggacccccgatcctgtcggctttttgagcgttccccacaaa
cgttccaacccgaacatacacatctgccagatctcccagggctgtaattttgcctgttct
tactgcatagtccggcatgcccggggaaagctccggtccttcccgccggaagccatagtc
gaagatatccgcgcagccgttgccgaaggctgccgggaagtctggctcacctcccaggac
gacagccagtacggcatggacaccgggttcaagcttcccgaactcctccggttgatctcg
gaaatccccggcgacttcaaggtcagggtaggcatgatgaaccctttttccgtcctcccg
atcctcgacgacctggtggacgcctttgattccgacaaaatcttcaaacttctccacatc
ccaattcagtccgcttctcactccgtgctcaagcgcatgaaccgcctgcacaggatggaa
aacgtggacatcatcatcacgaaattccgggaccgtttcgaagacctttcccttttcacc
gacatcatcgttggtttctgtgacgaaagtgacgaggacttcaaggaaaccgtaacctgg
gtggaaaaatactgccccgaaaaagtcaatatttcccgttattccccccgcccccacacg
aaagctttctctttccggaaccttgattccaggatttccgtgcagcgttcccataccctt
cacaaagtctgcgagcagatcaagctcgagtccaaaaaggaaatgcttggctggaaaggc
agggtttttgtctcgaaatacacgagtatcggggacgttctcgcccgcacggactcgtac
aggcccgtggttatcagcggctcggaccttaaacccggacagtacgctgaggtggagatc
acggacgcgaccccggggtatttcctggggaaactgatcaggtga
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