Methanosarcina sp. MTP4: MSMTP_2861
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Entry
MSMTP_2861 CDS
T03850
Name
(GenBank) Transcription initiation factor B
KO
K03124
transcription initiation factor TFIIB
Organism
metm
Methanosarcina sp. MTP4
Pathway
metm03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
metm00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
MSMTP_2861
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
metm03021
]
MSMTP_2861
Transcription machinery [BR:
metm03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
MSMTP_2861
Prokaryotic type
Archaeal type
TFB
MSMTP_2861
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cas12f1-like_TNB
Sigma70_r4
Zn_ribbon_SprT
Lar_restr_allev
Zn_ribbon_LysW
RPA_interact_C
Zn_ribbon_IS1595
Trm112p
DUF7577
HTH_AsnC-type
BRF2-like_C_cyclin_rpt
HTH_Tnp_ISL3
Zn_ribbon_PaaD
A2L_zn_ribbon
zf-ChsH2
Ribosomal_S27e
Motif
Other DBs
NCBI-ProteinID:
AKB26330
LinkDB
All DBs
Position
complement(3735286..3736299)
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AA seq
337 aa
AA seq
DB search
MVEVERVRYSDNLEREKIRAMIKARKEKQKEQNFEKEKAVCPECGSRNLVHDYERAELVC
GDCGLVIDADFVDEGPEWRAFDHDQRMKRSRVGAPMTYTIHDKGLSTMIDWRNRDSYGKS
ISSKNRAQLYRLRKWQRRIRVSNATERNLAFALSELDRMASALGLPRTVRETAAVVYRKA
VDKNLIRGRSIEGVAAAALYAACRQCSVPRTLDEIEEVSRVSRKEIGRTYRFISRELALK
LMPTSPIDYVPRFCSGLNLKGEVQSKSVEILRQASEKELTSGRGPTGVAAAAIYIASILC
GERRTQREVADVAGVTEVTIRNRYKELAEELDIEIIL
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atggtagaagtcgaaagagttcgctattcggacaatcttgaaagagaaaaaatacgtgcc
atgatcaaagctcgcaaggagaagcaaaaagagcaaaattttgagaaggaaaaggccgtg
tgtccggaatgcggaagcaggaacctggtgcacgattatgagagggctgagctcgtgtgc
ggggactgcggactggtcattgacgccgactttgtagatgaaggtcccgaatggcgagct
ttcgatcacgatcagcgcatgaagcgttcccgtgtgggagcgcccatgacctatacaatc
cacgacaaagggctttccacgatgattgactggaggaacagggactcctacggaaagtct
atctcctccaaaaaccgtgctcaactctatcgtttaagaaaatggcagcgtagaatccgt
gtaagcaacgcaactgaaagaaaccttgcttttgctttatcagaactggacaggatggct
tcagctctcggtcttccgaggactgtccgggaaaccgcggccgtggtctacaggaaagct
gtggacaagaaccttatccgtggaaggagtattgaaggtgtggcagcagcagccctttac
gcggcttgccgccagtgcagcgtcccgaggacccttgacgagatcgaagaggtgtccagg
gtaagcaggaaggaaatcggaaggacataccgcttcatttcaagggaacttgccctgaag
ctcatgcctacttccccgatcgactacgtgcccaggttctgttccgggctcaacctgaaa
ggagaagtccagtccaagagcgttgagattttaaggcaggcttccgaaaaggaactcaca
agcggaagagggcccacaggcgttgcagcagctgcaatctatatcgcgtccattctctgc
ggcgagcgcagaacccagcgggaagttgcggatgtagcaggggtaacggaagttaccatc
aggaacaggtataaggagcttgcagaagagctggatattgaaattatcctctaa
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