Methanosarcina sp. MTP4: MSMTP_2863
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Entry
MSMTP_2863 CDS
T03850
Name
(GenBank) Geranylfarnesyl diphosphate synthase
KO
K13787
geranylgeranyl diphosphate synthase, type I [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
metm
Methanosarcina sp. MTP4
Pathway
metm00900
Terpenoid backbone biosynthesis
metm01100
Metabolic pathways
metm01110
Biosynthesis of secondary metabolites
Module
metm_M00365
C10-C20 isoprenoid biosynthesis, archaea
Brite
KEGG Orthology (KO) [BR:
metm00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
MSMTP_2863
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
metm01006
]
MSMTP_2863
Enzymes [BR:
metm01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
MSMTP_2863
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
MSMTP_2863
2.5.1.29 geranylgeranyl diphosphate synthase
MSMTP_2863
Prenyltransferases [BR:
metm01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
MSMTP_2863
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
AKB26332
UniProt:
A0A0E3NZ84
LinkDB
All DBs
Position
complement(3740142..3741107)
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AA seq
321 aa
AA seq
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MTLIDEIKKRTVHVDASIEDMLPVTHPEELYKASRYLVDAGGKRLRPAVLILAAEAVGST
LESVLPAAVAVELVHNFTLIHDDIMDKDDVRRGMPAVHMKWGEAGAILAGDTLYSKAFEI
LSRVENEPERILKCMDVLSRTCTEICEGQWLDMDFERRDRVTESEYLEMVEKKTSVLYAA
AAKIGGLLGGASDEVAEALSEYGRLIGIGFQMYDDVLDMITPQEVLGKVRGSDLKEGKYT
LIVIDAFRKGVKLEVFGRGSATQDETENAVRILYECGSIDFVQNLAISYIEEGKAKLDAL
EDCPEKDLLLQIADYMISRNY
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgacgctgattgatgagatcaagaagaggaccgtccatgtggatgccagcattgaggat
atgcttcctgtcacccatccggaggagctctacaaagcctcccgctacctcgtggatgcc
gggggaaagcgcctccgtcctgcggttctgatcctggctgcggaagctgtcggctccact
ctagagtctgttcttcctgcagctgtggccgtggaactcgtacataatttcactctgatc
catgatgatatcatggacaaggacgatgtccgccgcgggatgcctgccgtccatatgaaa
tggggggaagccggagcgatcctcgccggggataccctctattccaaagctttcgagatc
ctctccagagtcgaaaacgaacctgaaaggattttaaaatgcatggatgtcctctcaagg
acctgcacggaaatctgtgaagggcagtggcttgacatggactttgaaaggcgtgaccgg
gtcactgaatccgagtaccttgagatggtcgagaagaaaacctcggtcctctatgcagcc
gccgcaaagatcgggggcctcctgggaggagcttcggatgaagtcgccgaggctttgtct
gagtacgggcgcttgatagggattggtttccagatgtatgacgatgtcctggacatgatc
acccctcaggaggtgctcggaaaagtccggggaagcgacctgaaagaagggaagtacact
ctgatcgttatcgatgccttccggaaaggcgtgaagctggaggttttcgggaggggcagt
gccactcaggatgaaaccgaaaacgccgtcaggatcctttacgaatgcggttcgatcgat
ttcgtacagaacctcgcaatctcgtacatcgaagaaggcaaggcaaagctggatgccctg
gaagactgtcctgaaaaggacctcctcctccagattgccgactacatgatttcaagaaac
tattga
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