Methanosarcina sp. MTP4: MSMTP_3027 Help Entry MSMTP_3027        CDS       T03850                                  Name (GenBank) RNA-2',3'-PO4:RNA-5'-OH ligase   KO K14415   tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8] Organism metm  Methanosarcina sp. MTP4 Brite KEGG Orthology (KO) [BR:metm00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03016 Transfer RNA biogenesis [BR:metm03016]     MSMTP_3027 Enzymes [BR:metm01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.8  3'-phosphate/5'-hydroxy nucleic acid ligase      MSMTP_3027 Transfer RNA biogenesis [BR:metm03016]  Eukaryotic type   tRNA spricing factors    tRNA splicing ligase complex     MSMTP_3027  Prokaryotic type    tRNA splicing ligases     MSMTP_3027 SSDB OrthologParalogGFIT Motif Pfam:  RtcB Motif Other DBs NCBI-ProteinID:  AKB26496 LinkDB All DBs Position complement(3940689..3942236) Genome browser AA seq 515 aa AA seqDB search MKANEETGSEYGGLESAGSQSEGTESAGPESMLTSVRGMVRKLSENSWEIPVGHTPGMQV PGRLFVSEKLLASIDPGTIDQIANVSTLPGIQKYSMAMPDAHLGYGFAIGGVAAFDSEEG IISPGGVGFDINCGVRLIKTNLQKEEVVPHIKELTDGLFRNVPSGVGSKSRIRASDKELD DAFLHGAKWAVESGYGVEADTEHCEGNGFLEGADPVYVSDKARKRGKPQFGTLGSGNHFL EVQYVDEIYDQGVASAFGLEEGQVTVMVHCGSRGAGHQICTDHLQTLSQAVKKYGIQIPD KQLACAPAQSKEAQSYFKAMLCAANYAWANRQVITHWTRETFEQVFGRDSDELGMDLLYD VAHNVAKLEEHLIEGRKKEVYVHRKGATRAFPPGHPEVPAAFRDVGQPVLIPGSMGTASY ILCGTKEAMDISFGSACHGAGRVMSRAHAKKEFRGESIKEKLEAMGITVRATHPSVIAEE APDVYKSSSEVVNVVHELGIARKVARVLPLGVAKG NT seq 1548 nt NT seq  +upstreamnt  +downstreamnt atgaaagcaaatgaggagacaggatcggaatatggaggattggagagcgcgggttcgcaa agtgaagggacagaaagtgcaggcccggaaagtatgcttacgagtgtgaggggcatggtc cggaagctttccgaaaacagctgggaaatccctgtcgggcacactcccggaatgcaagtc ccggggcgcctttttgtgtccgaaaaactgcttgcaagcatcgatccgggcacaattgac cagattgcaaatgtgtcaactcttcctggaattcagaaatattctatggctatgccggat gctcacctgggatacggctttgccatcggcggggtcgcggcctttgatagtgaagagggg attatcagtcccggtggagtgggctttgacattaactgcggagtccgtttgataaagacg aacctgcaaaaggaggaggtggtccctcatattaaggagcttacggacggccttttcaga aacgtcccctccggagtcgggtcaaaaagccggatcagggcttctgataaagagctggat gatgctttcctgcatggggcaaagtgggctgtggaatcagggtacggtgtggaagccgac accgagcactgtgaagggaacgggttccttgaaggggcagatcccgtatatgttagcgat aaagcccggaagcgagggaaaccccagttcggtactctgggaagtgggaaccatttcctg gaagttcagtatgtggacgagatttatgatcagggggtggcttcggctttcgggcttgag gaagggcaggtcactgtcatggttcactgcgggtccagaggtgccgggcaccagatttgc acggaccaccttcagaccttgtcccaggctgtgaagaagtacggcatacagatccctgat aagcagcttgcctgcgcccctgcgcagtcaaaggaagctcagtcctacttcaaggcaatg ctctgtgccgcaaattatgcctgggcgaaccggcaggttatcactcactggacaagggaa acttttgaacaggtttttggcagggactccgatgagcttgggatggaccttctctacgat gttgcccataacgtggcaaaactcgaggagcatcttatcgaaggcaggaaaaaggaagtg tatgtgcacaggaaaggagctacccgggcctttcctcctggtcatccggaggtccctgca gcgtttagggatgtcgggcagcctgttttgatccctggtagtatggggactgcttcctac attctctgcggtacgaaagaggctatggatatctcttttggaagcgcttgtcacggggct ggcagggtcatgagccgggcgcacgccaagaaggaattcaggggagagagcataaaggag aaacttgaagccatggggattacggtaagggccacacacccgtccgttattgcagaagaa gcccccgacgtttacaagtcgagtagtgaggtggtaaatgtagtgcatgaactcgggatt gcccggaaggttgcacgtgttctgcctctcggggtggcaaaaggctaa

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