Methanosarcina sp. MTP4: MSMTP_3079
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Entry
MSMTP_3079 CDS
T03850
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
metm
Methanosarcina sp. MTP4
Brite
KEGG Orthology (KO) [BR:
metm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
metm03016
]
MSMTP_3079
Enzymes [BR:
metm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
MSMTP_3079
Transfer RNA biogenesis [BR:
metm03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MSMTP_3079
Prokaryotic type
MSMTP_3079
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
AKB26548
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All DBs
Position
complement(4004548..4005366)
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AA seq
272 aa
AA seq
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MIGMRVALKLAYIGTEFHGSQIQPNVDTVEGEIFKALRNLQIIEGPKSANYTCAGRTDAG
VHALEQVVAFDTDKPNLAIPRVINSELPPSVWTWAHAEVSPSFDARRDAVSRRYRYVMSG
EEYDISKMREASKLLLGTHDFANFSKADGDKSTVRTMERIEVRVDGELTKIDVTGNAFLW
NMVRKIVTALTMIGNGVRDEDWLLQMLNPEIYEEGIEPAPAHGLTLMEIKYPFHLEWAED
SYSIRRANEQNYKNILRHRVMAEVIEELIFKE
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgattggtatgagagttgctttaaaacttgcatacataggcaccgagttccacggctcc
cagatccaacccaatgttgacaccgtggaaggggagatcttcaaagctctccggaatctc
caaatcatcgaaggtcccaaatctgccaattacacatgtgcgggcaggaccgacgcagga
gtccatgctcttgaacaggtcgttgcttttgataccgataagcctaaccttgcaatccca
agagtcatcaattccgaacttcccccctctgtctggacctgggctcatgcggaagtttcc
ccctcctttgacgccaggcgggatgcagtttccaggcgctaccgctacgtgatgagtggg
gaagaatacgacatctcaaagatgagggaggcttcaaagctccttctggggacccacgat
tttgcgaacttttccaaagctgacggggacaagagtacggtccgtaccatggagcgtatt
gaagtgcgggttgacggggagcttacaaaaatcgatgtaaccggtaatgcctttctctgg
aacatggtccggaaaatcgtaaccgcccttaccatgattggaaacggggtcagggatgag
gactggctgctccagatgctcaatcccgaaatctacgaagaaggaatcgaacctgctcct
gcacacgggttgaccctcatggaaatcaaatatcctttccacctagagtgggcagaggac
agctactccatccgtagggcaaacgaacagaactacaagaatatcctcaggcacagggta
atggctgaagtgatcgaggaacttattttcaaggaataa
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