Methanosarcina sp. MTP4: MSMTP_3176
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Entry
MSMTP_3176 CDS
T03850
Name
(GenBank) Chaperone protein DnaK
KO
K04043
molecular chaperone DnaK
Organism
metm
Methanosarcina sp. MTP4
Pathway
metm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
metm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MSMTP_3176
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
metm03019
]
MSMTP_3176
03110 Chaperones and folding catalysts [BR:
metm03110
]
MSMTP_3176
03029 Mitochondrial biogenesis [BR:
metm03029
]
MSMTP_3176
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
metm04147
]
MSMTP_3176
Messenger RNA biogenesis [BR:
metm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
MSMTP_3176
Chaperones and folding catalysts [BR:
metm03110
]
Heat shock proteins
HSP70 / DNAK
MSMTP_3176
Mitochondrial biogenesis [BR:
metm03029
]
Mitochondrial protein import machinery
Matrix
MMC/PAM proteins
MSMTP_3176
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Proteins involved in Fe-S cluster biogenesis
MSMTP_3176
Exosome [BR:
metm04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
MSMTP_3176
Exosomal proteins of breast cancer cells
MSMTP_3176
Exosomal proteins of colorectal cancer cells
MSMTP_3176
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FtsA
Ppx-GppA
MreB-like_C
FGGY_C
DUF438
Motif
Other DBs
NCBI-ProteinID:
AKB26645
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All DBs
Position
complement(4116555..4118012)
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AA seq
485 aa
AA seq
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MGIDLGTTNSCTAIIELGEPKVITNSEGKRLTPSVVGFSKKNELLVGELAKRQIVSNPEN
SVQSIKRYMGKPDYRVPLNNEHYTPHGISAMILQKLKVDAEKYLGDAVGKAVITVPAYFN
DSQRFATKKAGEMAGLDVLRVINEPTAAALAYGLRDGVQDQKILVYDLGGGTFDVSILKI
KHGVFEVLATCGDTELGGDDFDRKIVDYLLSEFKEAEGTDLSENVEAMQRIKEAAERCKV
DLSSLMTANVDLPYISENKRLDMEVSREQFEAMTEDLVNKTISIMEKSLKDAGLSPQDID
EVILVGGSTRIPAVAKRVEDFMEKSPLQSINPDEVVAMGAAVQAGILGNEYLKSSGNQQV
DGGNLVLLDVTSLTLGFETVGDTTAFIIPRNTTIPTRNSKVFTTHYDNQEVVRGKILQGE
EQEASKNVALGTIILENIPPSLKGVPRIEVTFDIDANGIINATARDLATGNMRSVTIERP
AGLND
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
ttgggtatagaccttgggaccaccaattcgtgtacagcaataatcgaactcggggaaccg
aaggtcattacaaactcagaaggaaaaaggcttacaccttcagttgtaggtttttcaaaa
aagaatgaactgcttgtgggagaactcgccaaaaggcagatagtttccaatcccgagaat
tccgttcagtccataaagcgatatatgggaaaacctgactacagggtgccgctgaacaac
gagcactatacaccgcacggaatctctgcaatgattctccagaagcttaaagtcgatgcg
gagaaataccttggggatgctgttggaaaagccgtgattacggttccggcttattttaac
gattctcagcgcttcgcaacgaaaaaagctggggaaatggcaggcttggatgtactgagg
gttataaacgaacctacagcggcagcccttgcctacggcctgagagacggtgtccaggac
cagaaaatcctggtttacgacctcggcggcggaacttttgatgtatcgatcctcaaaatc
aaacacggtgttttcgaagtgctggctacctgtggggatactgaacttggtggtgatgac
ttcgaccggaaaatcgtcgattatttgctctcggagtttaaggaagccgaagggaccgat
ctctctgaaaatgtggaggccatgcagcgtatcaaggaagccgcggagagatgcaaggtt
gacctgtcttcccttatgactgcaaacgttgatctcccttacatttctgaaaataaacgt
ctggatatggaggtctcaagggaacaattcgaagcaatgaccgaggaccttgttaataaa
accatttcaatcatggaaaaatccctgaaagatgcaggcctttctcctcaagatattgat
gaagtcattcttgtgggcgggtctaccagaatccctgccgtagcgaaacgggtagaagat
ttcatggaaaaatccccccttcagagcattaaccctgatgaagttgtggctatgggagcg
gctgtccaggccgggatcctcggaaacgagtacctgaaaagttccgggaaccagcaggtc
gatggcggcaatcttgtgctcctcgacgtcacctctcttacactgggattcgaaaccgta
ggggacacgacggcattcataattccccggaacacgacgatacctaccagaaatagtaag
gtctttaccactcattatgacaaccaggaggttgtcaggggtaagattcttcagggagaa
gagcaggaggcatccaaaaatgtggctctgggaacaattatcctggagaatattcctccc
tctctgaaaggtgtcccgcggatagaggttacttttgatatcgatgccaacggcataata
aacgcaacagccagagaccttgcaacaggaaatatgcgcagcgttactatcgaaaggcct
gcagggctcaatgactga
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