Methanosarcina sp. MTP4: MSMTP_3183
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Entry
MSMTP_3183 CDS
T03850
Name
(GenBank) DNA mismatch repair protein
KO
K07456
DNA mismatch repair protein MutS2
Organism
metm
Methanosarcina sp. MTP4
Pathway
metm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
metm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
MSMTP_3183
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
metm03400
]
MSMTP_3183
DNA repair and recombination proteins [BR:
metm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
MSMTP_3183
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
AKB26652
UniProt:
A0A0E3P001
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Position
complement(4129820..4131943)
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AA seq
707 aa
AA seq
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MESVQQLSGVKELSGIGERVAERLIEHFGTEEAALRAILEGDVAALSEVNGVSHNFALSL
ARDAKARAEDCSISDFLKTKEATDLYSRLLELVKSFTHTPHARDKMNLFYPYPASRRALI
EKRRVFVEEYLELARSLSGDSEFPGLLSRVRRLKPVPGNLRARDRIILSGDPETLGVVKE
RFQAFLPVQAVENLSEFVDLARGYSHTIVFDNTFLGFDMPEDLEPEFFPDPEKVEFWQVV
PEMELAFFARNLDCIRACLQVVSVLRSRNFSFFEEMSEEGLETLETALSKLGEDGKPKEG
FDPELDRLGAALEGLDRVLATALQEANLRMNRALEESSLTLSGQDLLKLVSGGIEIKDLL
AKELYKLYREELEAVKEELAGKLGLLSHEKLLLDSLFSDEISYPLQADQAQLQLFRQKLS
RGLEKARLSRKREIAKVLSAYGVLVGKLVREVLEFDLGFSVGCFAEHFSLKMPELIPDAG
IGLLEGENLFLKARHGEIDPVSYSVGKASFFPDAGENRVVLLSGVNSGGKTSLLELLAQC
VILGHMGFPAPAKKLELGPIEELYYFGKSKGTLDAGAFETTLKQFSVLSESSGKLVLADE
LESITEPGASARIIAGILEYLVRNEQSLGIFVSHLSELILEDTEAEVRVDGIEAKGLDSN
LELVVDRTPVYNHVARSTPELIVERLFRKTSGKEQEFYAHLKGKFRG
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atggagtctgttcagcagctttcaggtgtaaaggaactttctggaataggtgaacgagtt
gccgaaaggctgatcgaacatttcgggaccgaagaagcggcgctcagggcaattctcgaa
ggggacgttgccgcgctttccgaggttaacggggtgagccataactttgccctttccctt
gccagggatgcgaaagccagggccgaagactgctctatttccgattttttgaagactaaa
gaggcaacagacctctactcccgcctgctcgaactggttaaaagctttacacatacgccc
catgcccgggacaaaatgaacctcttttatccttaccctgcttcccgcagggcccttatc
gagaagagaagggttttcgtggaggagtatctcgaacttgctcgttccctttccggagat
tcggaatttccgggtctgctctcaagggtcaggaggcttaagcccgtgcccggaaacctt
cgggcaagagaccgtatcattctctccggagacccggaaactttaggggttgtaaaggag
aggttccaggcctttctcccggtccaggccgtggagaacctttccgaattcgtggacctt
gccaggggctattcccatacgatcgtttttgataacactttcctgggcttcgacatgccc
gaggaccttgagcccgaatttttccctgacccggaaaaggtggaattctggcaggtagta
ccggaaatggaacttgccttttttgcccggaacctggactgcatccgggcctgtctgcag
gttgtatccgtccttcgcagccgtaatttcagtttctttgaggaaatgtcggaagaaggg
cttgaaaccctcgaaaccgctctttcgaagctgggggaagacgggaagccgaaagaaggg
tttgacccggaactggaccgtctgggagccgcccttgaagggctggaccgcgttcttgca
actgccctacaggaagcaaacctgcggatgaaccgggcgcttgaagagagttcccttacc
cttagcgggcaggacctcctcaagctcgtaagcgggggcattgaaatcaaggacctgctg
gcaaaggagctctacaaactctatagggaagagcttgaagctgtaaaggaagaactggca
gggaagctcgggctgctttcgcatgaaaaactgctgctggactctcttttctctgatgag
atttcctatcccctccaggccgaccaggcccagctccagctcttcaggcagaaactttcc
agagggctggaaaaggcaaggctttctcggaaaagggaaattgcaaaagtcctttccgct
tacggggtgcttgtaggaaagctcgtcagggaagtcctggaatttgacctgggcttttca
gtgggctgctttgcagagcacttttccctgaaaatgccggagctgatacctgatgcaggg
atcgggcttctggaaggggaaaacctttttttgaaagccaggcatggggaaattgaccct
gtcagttattctgtcggaaaggcaagttttttccctgacgcgggagaaaaccgggttgtg
ctccttagcggcgtgaattccgggggcaagacctccctgcttgaacttcttgcccagtgc
gttattctggggcacatgggttttcctgcccctgcaaaaaagcttgagctcggccccatc
gaagaactctactatttcgggaaatcgaaagggactctggacgcaggggctttcgagacc
acccttaaacagttctccgtgctctccgaaagttccgggaaactggtacttgccgacgaa
cttgagtccatcaccgagccaggggcttcggccaggatcattgcgggcatccttgaatac
cttgtccgaaacgagcaaagccttgggatatttgtctctcacctctcggagctgatcctg
gaagatacggaggctgaggtccgggtggacgggatcgaagcaaagggcctggactcaaac
ctggagttggtcgtggacaggactccggtctacaaccatgtggcaagaagtacgcccgaa
ctgattgtggagcgccttttcaggaaaacctcaggaaaagaacaggagttttatgcacat
ttgaaaggaaaattccgggggtaa
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