Methanosarcina sp. MTP4: MSMTP_3212
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Entry
MSMTP_3212 CDS
T03850
Name
(GenBank) Eukaryotic peptide chain release factor subunit 1
KO
K03265
peptide chain release factor subunit 1
Organism
metm
Methanosarcina sp. MTP4
Pathway
metm03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
metm00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
MSMTP_3212
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
metm03019
]
MSMTP_3212
03012 Translation factors [BR:
metm03012
]
MSMTP_3212
Messenger RNA biogenesis [BR:
metm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
MSMTP_3212
Translation factors [BR:
metm03012
]
Eukaryotic type
Release factors
MSMTP_3212
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
HMBD
Zn_ribbon_LysW
Vps36-NZF-N
Zn_ribbon_8
HypA
Zn_ribbon_TFIIB
Spectrin_3
PARP_regulatory
Motif
Other DBs
NCBI-ProteinID:
AKB26681
UniProt:
A0A0E3L7F5
LinkDB
All DBs
Position
complement(4162194..4163441)
Genome browser
AA seq
415 aa
AA seq
DB search
MTEQSAHEKYEFKKKLEGLRDKRGRGTELISLYIPHDKQISDVTNQLKDEHGQASNIKSK
LTKTNVQGAIESLLSRLRYLDKVPENGIVYFTGAVDIGANKTSMESEVIYPPDPIITYKY
HCDSAFYLEPLEDMLKDKSTFGLLVLDRREATVGLLTGKKIESFRRLTSTVPGKQRKGGQ
SAHRFQQLRLIAIHEFYKRIGDAASDIFMSVDHKDFKGVLIGGPSPTKEEFYDGEFFHHE
ILKKILGLFDVAYTDESGLSELVNAAADKLQDLELTAQKNVVQDFFKELISDSGKVAYGE
DQVRANLEIGAVEKLLLSEDLRAERVTTKCSVCGFENKWTRHWKPGEAAPTAGNCPKCGS
SLEVTDVTDIVDELSELCDQSGTKVFFVSTDFEEGAQLMTAFGGITAILRYNTGI
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgactgaacaatcagcacacgaaaaatacgagttcaaaaagaaacttgagggtctccgg
gataaacgggggagaggcactgaactgatctccctttatatccctcatgataagcagatc
tcggatgttacaaaccagctaaaggatgaacacgggcaggcttcgaatatcaagtccaag
cttaccaagacaaacgtgcagggtgcgatcgagtccctcttatcaaggctcagatatctg
gataaggtgcctgaaaacgggatcgtctactttacaggggctgtggacatcggagcgaac
aagaccagcatggaaagcgaggtcatttacccgcctgaccccattatcacttacaagtac
cactgtgactctgccttttacctcgaaccccttgaagatatgctcaaggacaagagcact
ttcgggctgctggtcctggaccgcagggaggctaccgtcggtctgcttaccggaaagaag
atcgagtcttttcgccgcctgacctccacggttccgggcaagcagaggaaaggtgggcag
agtgcacacaggttccagcagctcaggctcattgcgatccacgagttctacaaacggatc
ggggacgctgcaagtgatatattcatgtcggtcgatcataaggactttaaaggcgtcctt
attggcgggccttcccctacaaaagaagagttctacgacggggagtttttccaccacgag
atcctgaaaaagatcctcgggctctttgacgttgcctacaccgacgaatcgggcctgtct
gagcttgtaaacgcagctgcggacaagctccaggaccttgagctaactgcccagaaaaat
gtggtccaggacttcttcaaggaactgatttccgactccggaaaagtagcctatggggaa
gaccaggtccgggcaaaccttgaaatcggggctgtggaaaagctcctgctctccgaagac
ttgcgggctgaaagggttaccacgaagtgcagtgtctgtggatttgaaaacaagtggacc
cggcactggaaacccggagaagcagcacctaccgccgggaactgccctaaatgcggctcc
tccctggaagtcacggatgtaacggacattgtagacgaactctccgaactttgcgaccag
agcgggacaaaagttttcttcgtgtccacggatttcgaggagggggctcagctcatgact
gcctttggcggaattaccgcaatcttgaggtacaacacgggaatttga
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