Methanobacterium sp. MZ-A1: BK008_00220
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Entry
BK008_00220 CDS
T05317
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
metn
Methanobacterium sp. MZ-A1
Brite
KEGG Orthology (KO) [BR:
metn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
metn03016
]
BK008_00220
Enzymes [BR:
metn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
BK008_00220
Transfer RNA biogenesis [BR:
metn03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BK008_00220
Prokaryotic type
BK008_00220
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_C_2
TruB_N
PUA
DKCLD
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
AUB56891
UniProt:
A0A2H4VFL8
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All DBs
Position
complement(47209..48171)
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AA seq
320 aa
AA seq
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MAELLQKAYGETDPQYGSPPEERPIEEHLSRGIINLDKSSGPTSHEIDAWVKRILQCDKT
GHGGTLDPRVTGVLPIGIDNATRAIQLLLEAPKEYVCLMRIHEDVGKERVVNILEEFTGK
IFQTPPLRSAVKRELRVRSVYYVNILEIDGQDALFRIGCEAGTYIRKYCHDIGEALGCGA
HMAELRRTRVGDFQEDETLKTLQDVTDAYHYWKEDDDEAPLRECVLPMEQAASHLKQVVV
RDSAVDALCHGADLAAGGILQLSEGIKRKETLTVLTLKGELVAAGEALATTNEIDQAEKG
IMVNIKKVFMEPGTYPMMWK
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggcagaactccttcaaaaagcctacggggaaacagatccccaatacggctctccgccg
gaagaaaggcctattgaggagcatctgtccaggggcataattaacctggataaatcctcc
ggcccaacatcccatgaaatcgatgcatgggttaaacggatcctccagtgtgacaaaacc
ggtcacggtggaactctggatcccagggtcaccggagtactgcccattggaattgacaat
gcaacccgggccatacaactactcctggaggcacccaaagaatacgtatgcctcatgcgc
atccacgaagatgtggggaaagagcgtgtggtgaatattctggaagagttcaccgggaaa
atattccaaacacccccattgcgttctgcagtgaaaagggaactcagggtgcggagcgta
tactacgtgaacatcctggagatagatggtcaggatgcactattccgtattggttgtgaa
gccggtacctacatccgtaagtactgtcacgatattggtgaagcattaggatgcggagcc
cacatggcagaactccgccgaacacgtgtcggagacttccaggaggatgaaacacttaaa
accctccaggacgtcactgatgcctaccattactggaaggaagatgatgacgaggcaccc
ctccgggagtgtgtgctccccatggaacaggccgccagccaccttaaacaagtggtagta
cgggattcagcagtggatgcactgtgccacggtgcggatctggcagccggcggaatactc
cagttaagtgaaggtattaagaggaaagaaaccctgacagtcctaacccttaagggtgaa
ctggtggcagctggtgaggcactggccaccaccaatgaaattgaccaggccgagaagggc
atcatggtaaatataaaaaaggtttttatggaaccaggaacatacccaatgatgtggaag
taa
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