Methanobacterium sp. MZ-A1: BK008_01395
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Entry
BK008_01395 CDS
T05317
Name
(GenBank) tRNA-intron lyase
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
metn
Methanobacterium sp. MZ-A1
Brite
KEGG Orthology (KO) [BR:
metn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
metn03016
]
BK008_01395
Enzymes [BR:
metn01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
BK008_01395
Transfer RNA biogenesis [BR:
metn03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
BK008_01395
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Sen15
Ribosomal_L32e
Motif
Other DBs
NCBI-ProteinID:
AUB57104
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Position
282110..282613
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AA seq
167 aa
AA seq
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MDAELIGELVIIKDKKAVALNEKSHYGKFNQDELQISLMEAHYLQEKGKITIFDHGKIFS
LDEMRELIQNKDLLYRYIVFRDLRNRGYIVKTGFKYGSEFRLYERGKSPGDGHSDFVVKV
VTENQNISVLNFSSYVRVAHGVNKKLLLAVVDDEQDITYYNVEWTRP
NT seq
504 nt
NT seq
+upstream
nt +downstream
nt
atggatgcagagttaataggagaactagtaattatcaaggataaaaaagctgttgccctt
aatgaaaaaagtcattatgggaagtttaaccaggatgaactgcaaatttcattaatggag
gctcattatctccaggaaaagggaaaaataaccatttttgatcatggaaaaattttttcc
ctggatgaaatgagggaacttatccagaataaagacctgttataccggtatattgttttc
agagacctcagaaacagaggatacattgttaaaaccggtttcaaatacggatcagaattc
agattatacgaaaggggtaaatctccaggtgatggtcattctgattttgtggtgaaagtg
gtaactgaaaatcaaaacatatctgtacttaacttttccagttacgttcgtgtggcccac
ggagttaacaagaaactcttactggcagtggtggatgatgaacaggacatcacctactac
aatgttgagtggacccggccataa
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