Methanobacterium sp. MZ-A1: BK008_01725
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Entry
BK008_01725 CDS
T05317
Name
(GenBank) AAA family ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
metn
Methanobacterium sp. MZ-A1
Pathway
metn04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
metn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
BK008_01725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
metn03019
]
BK008_01725
03009 Ribosome biogenesis [BR:
metn03009
]
BK008_01725
04131 Membrane trafficking [BR:
metn04131
]
BK008_01725
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
metn04147
]
BK008_01725
Messenger RNA biogenesis [BR:
metn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
BK008_01725
Ribosome biogenesis [BR:
metn03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
BK008_01725
Membrane trafficking [BR:
metn04131
]
SNARE
SNARE associated proteins
Others
BK008_01725
Autophagy
Aggrephagy
Other aggrephagy associated proteins
BK008_01725
Exosome [BR:
metn04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
BK008_01725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
RuvB_N
AAA_5
AAA_14
AAA_2
CDC48_2
TIP49
AAA_22
AAA_33
AAA_lid_PRS2_C
AAA_28
nSTAND3
ABC_tran
RNA_helicase
AAA_7
Sigma54_activat
DUF815
Mg_chelatase
NPHP3_N
AAA_18
ATPase
IstB_IS21
AAA_19
AAA_17
Bac_DnaA
Zeta_toxin
TsaE
AAA_3
DUF5906
SLFN-g3_helicase
NB-ARC
PhoH
KAP_NTPase
Motif
Other DBs
NCBI-ProteinID:
AUB57166
UniProt:
A0A2H4VGF2
LinkDB
All DBs
Position
complement(341159..343441)
Genome browser
AA seq
760 aa
AA seq
DB search
MPDSGEIELRVAEALQQDVGKGMVRIDHELMAKIGASPGDIVEIIGKRTTGAIAGNSYPA
DVGLEIVRMDGLARSNAGTSIGEMITIRKAQPRMASKVVIAPAAKGMRIMASGDIIKRNL
MGRAVTRGDVIALVSPKRTKETLREFPGSEDIFREFFEATTPFSLGEIKFTVVSSNPAGL
VRINDTTHVEVRPEAVEVMEKKVPDVTYDDVGGLKKEISKVREMIELPLRHPEIFDRLGI
DPPKGVLLHGAPGTGKTLLAKAVSSESGSNFVAINGPEVMSKFVGEAEKKIREIFEEAAE
NAPTVIFIDEIDAIAPKREEVTGEVERRVVAQILALMDGLKERGKVIVIGATNRPDALDQ
ALRRPGRFDREIELRVPDREGRIEILEIHTRAMPLADDVNIDELAETTHGFVGADLAALC
REAAMNALRRVLPDIDLQEQRIAPGILEKLFVTNNDFLDSMKSISPSALREVFIEVPNVH
WEDIGGLDELKESLKEVVEWPLSNISSFQRIGIQPSKGILLFGPPGTGKTLLTKAVATES
KANFISVKGSEILSKWFGESERKISEIFKKAKQASPCIIFFDEIDAIAPIRGAAAGEPRV
TERMVNTILSEMDGLEELRGVVVIGATNRPDLMDPALLRPGRFDEVVLVPPPDEKARKEI
LKVHVGHMELDEDVKLKELAKKTEGYSGADIEVLCRKAGMIALHEDMNILKVSYRHFKSA
LKKINPSTTPKTTEYYEQIAQKLGRGLEPKKVREDFREVA
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
ttgccggatagtggtgaaatagagcttagagttgctgaagcactacaacaggatgtaggc
aaaggaatggtacgaatagaccatgaattgatggctaaaatcggagcatctcctggtgac
attgtggaaataatcggtaaaagaactaccggtgctattgctggaaactcctatccggca
gatgtgggattggaaatcgtgcgtatggacggattggctcgttccaatgcaggaacttcc
attggagaaatgatcaccatacgaaaagcacaacctagaatggccagtaaagttgtcatt
gccccagcagcgaagggaatgcgcataatggcctcaggagacatcataaaacgaaatctc
atgggacgggccgttacccggggagatgtaatagccctggtatcccccaagagaactaaa
gaaacattaagggaatttccaggttcagaagacatattccgtgaatttttcgaagcaacc
actcccttttctctgggagaaatcaaatttaccgtggtatcatccaatcctgcgggattg
gttcgtatcaatgacactactcatgtggaagttcggccggaggcagtggaggtaatggaa
aaaaaagttccagatgtcacttatgacgatgtagggggacttaaaaaggaaatatcaaaa
gtccgggaaatgatagaacttcccctccgccaccccgaaatatttgaccgtctgggtata
gatccgccgaaaggagtgctattacatggtgcaccgggcacagggaagacattactggca
aaagctgtttctagtgagagtggttcaaattttgtggccataaatgggcctgaagtaatg
agtaaatttgtgggagaggctgaaaagaagatacgtgaaatattcgaagaagctgccgaa
aatgctcccactgtgattttcattgatgaaatcgatgccatagcccccaaaagggaagag
gtcactggtgaggttgaacgaagggtggtagctcagatattggcccttatggatgggttg
aaagaaaggggaaaggtaattgttattggcgccaccaaccgtcctgatgccctggaccag
gcattacgcagacctggacgctttgaccgtgaaattgaattacgtgtgcctgaccgggaa
ggaaggattgaaatactggagatacacacccgtgccatgcctctggcagatgatgttaac
attgatgaactggcagaaaccacccatggatttgtaggtgcagatctggcagcactttgt
agagaagcagctatgaatgctttaagaagagttttacctgatattgacctacaagagcag
cgtattgctcctggaatcctggaaaaactcttcgtaaccaacaatgattttttagattcc
atgaaatccatcagcccctctgcactgcgtgaagtattcattgaagtgcccaacgtccat
tgggaagatatcggtggactggatgaactgaaggaaagcctgaaagaagtggtggaatgg
cccttgagcaacatctcctctttccagcgaattggaatacaaccttccaaaggaattctc
ctgttcggtcctcctggaactggaaaaaccctgctcaccaaggcagtggccacagaatcc
aaggccaactttatctcagtaaagggatcagaaatactcagtaaatggttcggtgaatcc
gaacggaaaatctctgaaatattcaaaaaagccaaacaggcatctccctgcatcattttc
tttgatgaaatcgatgccatagctcctatcaggggtgctgctgccggtgaaccaagagtc
accgagcgcatggttaacaccatcctctctgagatggatgggctggaagaactcagagga
gtggtggttattggggccactaaccgtcctgatctaatggatccagcattgctacgtcct
ggaagatttgatgaagtggtactggtacctcctcctgatgaaaaagcacgaaaagaaata
ttaaaggttcacgtgggacacatggagttagatgaggatgttaaacttaaagaactggcc
aaaaaaactgaaggatactctggtgcagatatagaagttttatgccgtaaagctgggatg
atagctctccatgaagatatgaatattctaaaggtgtcctaccgccatttcaaatctgct
ctgaagaaaattaatccatccacaactcctaaaaccacggaatattacgagcaaattgct
cagaaactgggaaggggtttagaacctaaaaaggtgagggaagacttccgtgaagtggcc
taa
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