Methanobacterium sp. MZ-A1: BK008_01985
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Entry
BK008_01985 CDS
T05317
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
metn
Methanobacterium sp. MZ-A1
Brite
KEGG Orthology (KO) [BR:
metn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
metn03032
]
BK008_01985
03400 DNA repair and recombination proteins [BR:
metn03400
]
BK008_01985
Enzymes [BR:
metn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BK008_01985
DNA replication proteins [BR:
metn03032
]
Prokaryotic type
DNA Topoisomerases
BK008_01985
DNA repair and recombination proteins [BR:
metn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BK008_01985
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
RUNDC1
Auto_anti-p27
DUF7340
Motif
Other DBs
NCBI-ProteinID:
AUB57216
LinkDB
All DBs
Position
complement(403080..405236)
Genome browser
AA seq
718 aa
AA seq
DB search
MHEVIVCEKPKASEKIAGAIPGKAVKKSYKKVPYYEIEEGGKKTTVLSAVGHLYSLSPLK
KEKGRMFEVGWVPLYEKDKSKKYVKNYIDAIKKFSKNADRFIHACDYDIEGTLIGFNALK
YACGEDSIDNVVRMKFSTLTKEDLLRAYNEPIELDFNQVDSGEARHVLDFIFGVNISKNL
TDSVMKATSRYIQLSAGRVQTPTLAILVEREKEIQSFIPEPYWLIKAKIEGNIIADHKKG
KIFDKKVQDEILTDCEGKDARVSKIGIKETPQLPPVPFDLGSLQSEAYGVFGFSPKKTQS
IAQNLYAEGYTSYPRTSSQKLPPSIGYKKILGQLKKNAAFRKQIEKLKEPIKPREGKKTD
EAHPAIHPTGLIPKGLGRDYQKLYELIVYRFISVFGENGLLETMKTELDIGGQEFSFSRK
RMAKMGWREHYPYRKVENDEFPALKEGDCLDARAYSEEKETKPPARYNQASLIRELEKRG
LGTKSTRANIISILYDRKYVEGQKISVNQLGEHLIDTLKKYSEKITSEELTREFETKLEG
IMKAEVKKDEIITEAKSEVSSILDDIDANKMKIGEELYAAYRESMIVGKCKCGGNLIMIN
SQKGGSFVGCTSYPDCKSTYSMPRGATVLKTKCEECGLPMISFGKPRQRACMDPKCGRDG
DEPLQNEVVGVCPDCGKDLIKRRGRYGEFVGCSGFPRCRYTRSLEEKQEPTDESLKKP
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgcacgaagttatagtatgcgagaaacctaaggcatctgaaaagatagctggtgccata
cctggcaaagcagtaaagaagagttataaaaaagtaccttactatgaaatagaagaaggt
gggaaaaaaaccactgtactttcggcagtaggtcatttatactctttatctcccttaaaa
aaggaaaagggacgtatgtttgaagtggggtgggtgccactctatgagaaggataaaagc
aaaaagtatgtgaaaaattacattgatgccattaaaaaattctctaaaaatgcagatagg
ttcatacatgcctgcgattacgatattgaaggtacattaatcggattcaatgctttgaag
tatgcctgtggtgaggatagtattgataatgtggtacgtatgaaattctccacacttacc
aaggaagacctgttaagagcatacaatgaaccaattgaacttgatttcaatcaggtggat
agtggggaagctcgacatgttctggatttcatcttcggagtgaacatatccaaaaacctc
acggattcagtgatgaaagccaccagccgttacatacaactatctgctggccgagttcaa
accccaacactagccatcctggttgaaagggagaaagaaatacagagcttcatcccagaa
ccatactggcttataaaggctaaaatcgaaggaaatataattgccgatcataagaaaggt
aaaatcttcgataaaaaagtccaggatgaaatactgacagattgtgagggtaaagatgcc
agggtcagtaaaattggtattaaagaaaccccacagttacctccggttccatttgacctt
ggttctctgcaatctgaggcttacggagtttttggtttcagtcccaagaaaacccagtcc
attgcccagaatctctatgcggaaggatatacctcctatccccgtacatcatctcaaaaa
ttgccacctagcattggttataagaagatactagggcaacttaaaaagaacgctgcattc
agaaaacaaattgaaaagctcaaggaaccaatcaaacctcgtgaaggtaaaaaaacagat
gaagctcaccctgccatccaccccaccggcctgattcctaaagggctgggaagagactat
cagaaactctacgaacttattgtatacaggttcatcagtgttttcggtgagaatggtctc
ctggaaaccatgaaaaccgaactagatattgggggtcaggaattcagcttcagcaggaaa
agaatggcaaaaatgggttggagagaacattacccctaccgtaaagtggagaacgatgag
ttccctgcactcaaagagggggactgcctggatgccagggcatactccgaggaaaaggag
accaaacctccagccaggtataatcaggcttcactcatccgtgaactggaaaaacgtggt
cttgggaccaaatcaacccgtgctaatatcatatccattttgtacgatcggaaatacgtt
gaaggtcaaaagatctcagtcaatcagttgggtgagcacctcattgacaccctcaaaaaa
tactcggagaaaataaccagtgaagaactcacccgcgaatttgaaaccaaattagagggg
ataatgaaggctgaggttaaaaaggatgagataattactgaagccaaatcagaagtaagt
tccatactggatgatatcgatgctaacaagatgaaaattggggaagagctctacgctgcc
taccgggagagcatgattgtgggtaagtgtaaatgtggtggtaacctcatcatgatcaac
tcacagaaaggcggtagctttgtgggctgtacctcatatcccgattgtaaatcaacctac
tccatgcccaggggtgctacagttcttaaaacaaaatgtgaggaatgtggccttccaatg
atctcctttggaaaacccagacagagggcctgtatggatcctaaatgtggccgtgacggt
gatgaacctttacagaatgaagtggtgggagtctgtcccgactgtgggaaggatctcata
aaaagaaggggaagatacggtgaatttgtgggatgcagtgggtttccacgatgtcgctac
acccgttcactggaagaaaagcaggaacccacagatgaaagtcttaaaaaaccttaa
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