Methanobacterium sp. MZ-A1: BK008_05065
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Entry
BK008_05065 CDS
T05317
Name
(GenBank) DNA lyase
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
metn
Methanobacterium sp. MZ-A1
Pathway
metn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
metn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BK008_05065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
metn03400
]
BK008_05065
Enzymes [BR:
metn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
BK008_05065
DNA repair and recombination proteins [BR:
metn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BK008_05065
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
OGG_N
HHH
AlkA_N
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AUB59086
LinkDB
All DBs
Position
1021725..1022708
Genome browser
AA seq
327 aa
AA seq
DB search
MISEFSISPQKFKGSLNLSLTINSGQTSQPPWKKGNFYFQELIMIDDAPCLVKIRHDDAD
PEGDLEIIAESPENMTEKTIETSIREIFDLDHDLNRFYQFLGDDPKLAPTIDFCQGMRLF
KAHDPFECIISSISSANCSIIRWTRSIEDIKRKWGDGYRFSSGDFYTFPSAEVLSNVPEH
DLEEMQRAEDNLPDDFVFERNLQACGVGYRAKYIIKTASIVQSKINLQKLSKMKYEKAVD
TILELPGVGPKVADCILLYGFGMGEAFPVDVWIKRIIEDLYFPGEELKPQTVREFGMERY
GKWAGYVQLYLFHYARKSGLLESLRKK
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgataagtgaattttctatctcaccacaaaaattcaaaggatctctaaatctatccctc
accattaacagtgggcaaaccagccagcccccctggaaaaaaggtaatttttacttccag
gagcttataatgattgatgatgccccttgcctggttaaaattaggcatgatgatgcagat
cctgaaggtgaccttgaaataattgctgaatcccctgaaaatatgacagagaagactatt
gaaacttcaattcgggaaatattcgaccttgaccatgatctaaaccgtttttaccagttt
ttaggcgacgatcctaaactagcacctaccattgatttctgccagggaatgcgacttttc
aaggcccatgatccatttgaatgtatcatatcatccatatcatcagcaaactgttccata
atacgctggacacgttcaatagaagatattaaaaggaaatggggtgatgggtatcgtttt
agttcaggtgatttctacacattcccctctgcagaagttttgagtaatgtgccagaacac
gacttggaagaaatgcaaagagcagaagacaatttacctgatgattttgtctttgaaaga
aatctacaggcatgtggtgtgggttatcgggcaaaatacattattaagaccgcaagtata
gttcaatctaaaataaatcttcagaagttatctaaaatgaagtatgagaaagccgtcgac
accatcctagaactaccaggtgtggggccaaaagttgctgattgtatccttctatatggt
tttggtatgggcgaagcattcccggtggatgtgtggattaaaagaattatagaggacctt
tacttccctggtgaagaattaaagccacaaacagtccgagaatttgggatggaacgttac
ggtaaatgggcgggttacgttcaactctatttattccattatgcccgtaaatctggactc
ttagaatctttaagaaaaaaatga
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