Methanobacterium sp. MZ-A1: BK008_05740
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Entry
BK008_05740 CDS
T05317
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
metn
Methanobacterium sp. MZ-A1
Brite
KEGG Orthology (KO) [BR:
metn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
metn03016
]
BK008_05740
Enzymes [BR:
metn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
BK008_05740
Transfer RNA biogenesis [BR:
metn03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BK008_05740
Prokaryotic type
BK008_05740
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AUB57863
UniProt:
A0A2H4VIC9
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Position
1167818..1169071
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AA seq
417 aa
AA seq
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MLNAETYLTPQKGIGGQIRTKNEDFYVEEIPESNPSGEGPNTWLWIEKNSRTTLDVLLDI
ARELKINRKQMGFAGMKDKKAVTRQWICVSNKTPEELQGLGEKLHNVKIIDIIPNQKKLR
MGQLVGNKFRLMVRDVEDPGAAAQEAQEILNQLKERGVPNYYGYQRFGKDRPNTHLVGKA
LIMGGVKEAVDRYIGHPYDTEPKHIQEARRFYDEGELEESLESMPSGMRYEKMMLRALIK
EMKKRGELTEKSYILALRSIPKPLSRMLVHAYQSYLFNRAVSERTKLGIDQYVKGDILID
NEEHLIHEFSEEEIDNEIKNFQAHPSSPLYGSKVPLAGGKLGEMEQKILDEEKLKLEDFT
VPQMPKLGSHGIRRAMRFKIWDVSAESTDEGVLVSFSIPKGCYATAVLREVMKVDVY
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttaaatgcagaaacatatctcacccctcaaaaagggataggggggcagatcagaacc
aaaaatgaggatttctatgtggaggaaatcccggaaagtaatcccagtggtgaagggcca
aacacctggctttggattgagaaaaatagtaggaccactctggatgtgcttttagacatt
gcccgtgaacttaaaataaaccgaaagcaaatgggctttgcaggaatgaaggataaaaag
gcagtcaccagacagtggatatgcgtaagtaacaaaacccctgaagaactccaggggctg
ggagaaaagctccataatgttaaaattattgacataattcccaatcagaagaaacttcga
atggggcaactggtggggaacaagttccgtttaatggtaagagatgttgaggatcctggg
gcagctgctcaggaagctcaggaaatacttaaccagttaaaggagaggggagtgcctaac
tattatggataccagcgttttggtaaggaccgtcccaacacccacctggtgggtaaagca
ttaatcatggggggtgtaaaggaggcggtggaccgttacattggacacccttacgatact
gagccaaaacacatccaggaggcccgtcgattttatgatgaaggggaactggaggagtct
ctggagtcaatgcccagtgggatgagatacgagaagatgatgttacgtgccctaatcaag
gagatgaaaaaaaggggcgaattaacggagaaatcctatattttggcacttagaagcatc
cccaaacccctgagcaggatgcttgtccatgcataccagtcatatcttttcaacagagcg
gttagtgaacgtaccaagcttggtattgaccagtacgtgaagggagatattttaattgat
aatgaagaacatctgatccacgaattttcagaagaagaaattgataatgaaattaaaaac
ttccaggcccatccatcatcgccactctacggtagtaaagtgccactggccggtggtaaa
ctgggagaaatggagcagaagatattggatgaggagaaattgaaacttgaggactttacc
gtgccccagatgcctaaactgggtagtcatggtatacgcagggccatgcgctttaaaata
tgggatgtttctgctgaatcaactgatgagggtgttctggtgagtttctccattcccaag
ggttgttacgcaactgcagttttaagagaagttatgaaggtggatgtgtattga
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