Methanobacterium sp. MZ-A1: BK008_06330
Help
Entry
BK008_06330 CDS
T05317
Name
(GenBank) endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
metn
Methanobacterium sp. MZ-A1
Pathway
metn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
metn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BK008_06330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
metn03400
]
BK008_06330
Enzymes [BR:
metn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
BK008_06330
DNA repair and recombination proteins [BR:
metn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
BK008_06330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
UvdE
Motif
Other DBs
NCBI-ProteinID:
AUB57970
UniProt:
A0A2H4VIR9
LinkDB
All DBs
Position
1297205..1298077
Genome browser
AA seq
290 aa
AA seq
DB search
MKNKIKFGPAGNPLGFNGQTVEVCDYIRGIGLDAYEYQATYGVRIQKQSGLKLAENALDN
DVRVSMHAPYYINLSAQKEDVLERSIERLVQSARAAEWIGAYRIVFHPGFYTKYTPSQAL
DRCKGAINELLEKLDSRGIKKFTFAPETTGKRSQLGSLDEIIDICQSFDHFNPTIDFAHV
HARGRGCIKGADDYHRIMVKLEDGLDGIGGGKEVLHCHFTRIEYTDAGERKHHILTETEY
GPPLEPLLEALIECGWDATIICETPFLEKDALVMKQNYQDILEKQHVNTE
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaataagattaaattcggtccagcgggcaatcccctgggtttcaatggccaaaca
gtcgaagtttgtgactacatccgtggaataggtttggatgcctacgaatatcaagccacc
tatggggtgagaatccagaaacaatctggccttaaactggctgaaaatgccctagataat
gatgtaagggtttccatgcatgcaccttattacattaacctatctgcgcaaaaggaggat
gtactggaaagatcgattgaaaggctggttcaatcagccagggcggcggagtggataggt
gcctaccgtatagtttttcatccgggattttatacaaaatacactccatctcaagcattg
gataggtgtaaaggagctattaacgaacttctggagaaattagactcccggggaataaaa
aaattcactttcgcacctgagaccacaggcaaacgatcacaactaggtagtctggatgaa
atcattgatatttgccagtcttttgatcatttcaaccccaccattgactttgcccatgtt
cacgccagggggagaggttgtattaaaggggctgatgattatcaccgaataatggttaaa
ttagaggatggattggatggaattgggggtggaaaggaagtattgcactgtcattttact
aggattgaatacactgatgctggtgaaaggaaacaccacatccttacggaaacagaatac
ggccctccactggagccattactggaagcactgatagaatgtgggtgggatgctaccatt
atctgcgaaactccctttttagagaaagatgctctggtaatgaagcagaattatcaggat
atcctggaaaaacaacacgttaacacggaatag
DBGET
integrated database retrieval system