Methanobacterium sp. MZ-A1: BK008_07250
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Entry
BK008_07250 CDS
T05317
Name
(GenBank) DNA repair protein Rad50
KO
K03546
DNA repair protein SbcC/Rad50
Organism
metn
Methanobacterium sp. MZ-A1
Brite
KEGG Orthology (KO) [BR:
metn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
metn03400
]
BK008_07250
DNA repair and recombination proteins [BR:
metn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BK008_07250
Archaeal homologous recombinant proteins
BK008_07250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_27
AAA_21
SbcC_Walker_B
AAA_29
AAA_15
Rad50_zn_hook
MukB
AAA_19
ABC_tran
Ras
Motif
Other DBs
NCBI-ProteinID:
AUB58127
UniProt:
A0A2H4VJ51
LinkDB
All DBs
Position
complement(1477843..1480542)
Genome browser
AA seq
899 aa
AA seq
DB search
MIIESLHMKNFKSHQDTNIEFDTGISIIIGGNGAGKSSILEAVSFALFKQYTSKRIEQLI
TIGQKRMSVEIQFTAHGRTYRVLRERTKTSSKAIMKIKEGGRFQSLVSGDRQVTMEVQNL
LDMDGDLFLNAVYVRQGEIADLIERTSSEKKQMIGRLLGIDSLEKAWKNFKVILDGYNEK
KIRLEGRIESFKDLDEEFKTKKDKKRELSLQIKDVNLKREENIIESDLLREKKEILDKRS
LEFEKATTILKSKTDFLEQLEKTKKDLDNQLSEIILKEEEINQIKPRLKKLEVLKSLQDN
IKELKDLQKDEKKLVKIRDDIERFRDILNENEEYYNDYSRLDDEINTLQYAKDQFEGSRV
LIQQYTERKSKIEVKIRQALEKIDHVLEKSNQILDTEFDSVEEFQDHLSTSKPQLEAELM
IASESIQELKRELSNLQVKRENLDKPIKELERVKELCPICKSTITPQKRDELITDYQAEL
ENNHRSSEILKDKLKRIEGEKEKLDSQQSRIQSINLGILNEYLKSVDENRQEIKNIDSSL
NDLQGKMVILEKIETDIAQNKSKLRDIKGNYEKYLTARGSLESLGDYEEQLASLDEIKLS
IRKLKKKISILMEIAGDSVENLPGEIAYLEELSKTHQHLLGEVSQKDSLLRRIDENQSLI
QETLEELKKVQKVVEDSKYNKESHERVKKEWELKKDELMDLSGQKQLLVGQLHQLSDSIQ
TIEEKLNSLREYETELKNLKDFLKLLNLIRDLYGKDGVQKDLRNLSRPLIEEKTRELFEK
FNFEYSDVRLDEDYDVTIYGPRGESSLDMISGGEKIAVALALRLGITQVLSGGSLEMIML
DEPTIHLDAYRRQELIDLLKRMSIIPQMIIVTHDADLEDAADNIMKMEKEEGVSFLVES
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atgatcattgaaagtctccatatgaagaacttcaaatctcaccaggataccaatatcgaa
tttgatactggtatttccataataataggtggaaatggggctggtaagtccagtatactg
gaagcagtgagctttgcactttttaaacagtacaccagtaaacggattgaacagttgata
accattggtcagaaaaggatgtcagtggagatccagttcactgcccatggtcgtacttac
cgggtgctacgggaacgaactaaaacatcatcaaaagctattatgaagataaaagagggt
ggaagattccagtcactggtttcaggagataggcaggtgacaatggaggttcaaaacctg
ctggatatggatggtgatctgttcctaaatgcagtctatgtccgccagggagagatagct
gatctgattgaaagaacttcatcggaaaagaaacagatgatcggacgattattaggtatt
gattccctggagaaggcgtggaaaaattttaaagttatcctggatgggtacaacgaaaaa
aaaatcagattagaaggtaggatagaatcatttaaagacctagatgaagaattcaagacc
aaaaaagataaaaaaagagaattatccctccagattaaagatgtcaatcttaaaagagag
gaaaatattattgaatctgatttgctccgggaaaagaaagagattctggataaaaggagt
cttgaatttgaaaaggccaccaccatcctgaaatccaaaactgatttccttgaacagctt
gaaaaaaccaaaaaagatttggataaccagttgagtgaaattatccttaaagaagaagag
attaaccagatcaaaccacgattaaagaaacttgaagttttaaaaagtcttcaggacaat
attaaagagttaaaggatctgcagaaagatgagaaaaaactggttaagatcagggatgat
attgaacgttttagagatattttgaatgaaaatgaagagtattataatgattattcccgt
ttagacgatgaaattaatactttgcagtatgctaaggaccagtttgaaggaagccgtgtg
ctgatccagcaatacaccgaaagaaagtctaaaattgaggttaaaatccggcaggccctg
gagaaaatagatcacgttctggaaaaatctaaccagattctggatactgaatttgattct
gtggaagaattccaggatcatttatccacctccaaaccccaattagaggcagaactcatg
attgcttctgaatctattcaggagttaaaaagggaattatccaatttgcaggttaaaaga
gagaacctggataaacctataaaagaattggaacgagtgaaagagctttgccccatctgt
aaatccactataactcctcaaaaaagagatgaactgataacagattaccaggccgaacta
gaaaacaatcatcgaagttcggagattttgaaagataaattgaaaagaattgagggcgaa
aaagagaaactggactcccagcagtcccggattcaaagtataaatctggggatattgaat
gaatatttgaaatcagtggatgagaaccggcaggaaattaaaaacattgattccagtctc
aatgaccttcaggggaagatggttatcctggagaaaattgaaactgatattgcccagaat
aaatctaaactacgagatattaaaggaaattatgagaagtatcttactgcccgtggttct
ctggaatcccttggagattatgaagaacaattagcaagtttagatgaaattaaactatca
ataaggaagttgaagaagaagatcagcattctcatggaaattgcaggggatagtgtggaa
aacctccctggagaaatagcttacctggaagagttaagcaaaacccaccagcacttactg
ggtgaagtcagccagaaagactcactcctcagacggattgatgaaaaccagagcttaata
caggaaacccttgaagagttgaaaaaagtccagaaagtggttgaagattccaagtacaat
aaagaatcccatgaaagggtaaagaaggaatgggagttgaagaaagatgaattgatggat
ctcagtggccagaagcagttgctggttggtcaacttcaccaattatcagattcaatacaa
acaatagaagagaaactgaattccctacgagaatatgaaacagaattaaagaatttgaag
gattttttgaaacttttaaatcttatccgggatctctatggtaaggatggtgttcagaag
gatttgaggaacctatcccgaccacttattgaggagaaaacacgggagttgtttgagaag
ttcaactttgaatactctgacgtgcggctggatgaggattacgacgtgactatctacgga
ccccgaggagagagcagcctggacatgatcagtggtggtgaaaagatagcagtggccctt
gctttgaggttggggataacccaggtactctctggaggtagtttagagatgatcatgctg
gatgaacccaccatccacctggatgcctatcgccggcaggaactgattgatctattgaag
agaatgtccatcataccccagatgatcattgtcacccatgatgcggatctggaggatgct
gccgataacattatgaagatggaaaaagaagagggtgtttcatttctggtggaatcctaa
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