Methanobacterium sp. MZ-A1: BK008_08090
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Entry
BK008_08090 CDS
T05317
Name
(GenBank) transcription elongation factor Spt5
KO
K15172
transcription elongation factor SPT5
Organism
metn
Methanobacterium sp. MZ-A1
Brite
KEGG Orthology (KO) [BR:
metn00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
BK008_08090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
metn03021
]
BK008_08090
03019 Messenger RNA biogenesis [BR:
metn03019
]
BK008_08090
Transcription machinery [BR:
metn03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
BK008_08090
RNA polymerase I system
BK008_08090
Messenger RNA biogenesis [BR:
metn03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
BK008_08090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt5-NGN
KOW
DUF411
KOW1_SPT5
KOW4_SPT5
Motif
Other DBs
NCBI-ProteinID:
AUB58277
UniProt:
A0A2H4VJJ9
LinkDB
All DBs
Position
complement(1651781..1652224)
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AA seq
147 aa
AA seq
DB search
MIYAIRTLVGQEKNVARIIARNVKDSGIGVSAVLVPESLRGYILVESSTKLDLQNPAFKV
PHMKGAIEGDIPYEEIKSFLKPEPIIASIQKGSIVELISGPFKGEKAKVVRIDESREDVV
LELIEAAVPIPVTVKGDQIRLIQKEAD
NT seq
444 nt
NT seq
+upstream
nt +downstream
nt
ttgatctatgcaataagaaccctggttggtcaggaaaaaaacgtggcccgaataattgcc
aggaatgttaaagacagtgggattggagtgagtgccgtgctggttccagaaagtttacgt
ggatatatccttgttgaatcatccaccaagcttgatctgcagaatccggcctttaaagtg
cctcatatgaaaggagccatagaaggagacatcccatacgaagagataaaaagcttttta
aagccggaaccaataatagcttccatacagaagggaagtattgtggaattgatatccgga
ccattcaaaggagaaaaagccaaagtggttcgtattgatgaatccagagaagatgtggtt
ctggaacttattgaagcagcagttcccatcccagttaccgttaaaggtgatcagattaga
ttaatacagaaggaggcagattaa
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