Methanobacterium sp. MZ-A1: BK008_11335
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Entry
BK008_11335 CDS
T05317
Name
(GenBank) DNA helicase UvrD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
metn
Methanobacterium sp. MZ-A1
Pathway
metn03420
Nucleotide excision repair
metn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
metn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BK008_11335
03430 Mismatch repair
BK008_11335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
metn03400
]
BK008_11335
Enzymes [BR:
metn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BK008_11335
DNA repair and recombination proteins [BR:
metn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BK008_11335
MMR (mismatch excision repair)
Other MMR factors
BK008_11335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
AAA_30
AAA_11
DEAD
UvrD_C_2
Motif
Other DBs
NCBI-ProteinID:
AUB58842
UniProt:
A0A2H4VL82
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All DBs
Position
2342667..2345018
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AA seq
783 aa
AA seq
DB search
MILWETYQDIVTKHLNRRIRAEDNPDQNQAISAPLTQSQFLVAGPGSGKTTVMVLKILKF
IYVDDVHPSSILATTFTRKAANELRSRILSWGDEIRQVLLEDPEFEDLHPDLRGLDFNQI
ITGTLDSISEDVLRTHRDPGAPPPVVIEEFVASGLMLRIGLFDGDKHLNDDLREYLKGLR
GTSWGLNTPEMARNLLEIKDRLYYDQVYWNQLLENKDHPGFLLALESVAYYTQYLRDNLL
YDFASLEAEFLDQLIKGKLDKFTTTLKMVLVDEYQDTNLLQERIYFQLAKHALNNGGSLT
VVGDDDQSLYRFRGATVDLFTNYQTRITEKLNITPQLIYLKQNYRSTRTIVEICNQFCQL
DPRFQPARVKGKPPIEAERKKDYINFPVLGLFRDDLPTLARDLSEFIHKVLNQGYSFSHE
GEKYTIRADPQEGSPADLSVLMSSPLELSSSGKPRLPLLLRKNLQKYDLNVFNPRGSDLE
RAWQTALLCGLIMECIDPQCQVQDTIEKLPSQAKHNFAVWRNKAREYWEEDPEPVKPLSL
KRFVDAWQNRTPIGRSKWKSNVPLIELTYQLVTWIPHLKNDVESLVYLEAVTRTMSQTGI
FNNFGGEILHYDDEELNQASVREAIWNILVPLATGAIEVDEGLLETLPDDRINIMSIHQA
KGLEFPLVIVDVGSDFSKNYPAQEFKRFPREGGKPCNMEDELRTCSPLEEPDRSPRDRAF
DDLIRQYFVAFSRPQDVLLLVGLESVKDGYHTKQGPRRIANVATGWSRDGKWHWPRLENI
KHI
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
ttgattttatgggaaacataccaggacattgttactaaacacttaaaccgacggataagg
gcagaggacaacccggaccagaaccaggccataagtgcacccctcacccaatcccagttt
ctggtggctggaccgggtagtggtaaaaccacggtcatggttttgaagatactgaaattc
atctacgtggatgatgttcacccttcatccatattagccacaaccttcaccagaaaggca
gctaacgagttacgctccagaatcctttcatggggagacgagataagacaagttctcctg
gaggatcctgaatttgaagacctacatccagatctaagggggttagacttcaatcagatc
ataaccgggaccctggacagtatctcagaggatgtgctcagaacccaccgcgaccctgga
gcaccaccaccagtagtgattgaagaattcgtggccagtggattgatgctcagaatcgga
ttattcgatggtgataaacacctcaatgatgacttacgagaatatcttaaaggattacgg
ggtaccagttggggacttaacactccagaaatggcacgcaacctcctggagataaaggac
cggctatactatgaccaggtatactggaaccagctcctggaaaacaaggaccaccccggc
tttctactggccctggaatcagtggcctactacacccagtacctccgagataacctgctc
tatgactttgcctccctggaagctgaattcctggaccagctcattaagggaaaattggat
aaattcaccaccactctaaaaatggtactggtggatgaataccaggacaccaaccttctc
caggaaaggatatacttccagctggctaaacatgccctaaataatggtggtagccttact
gttgtgggggatgatgaccagtccctctaccgattcagaggagccactgtggatctattc
accaactaccaaaccaggataactgaaaaacttaacattaccccacagctcatctacctg
aaacagaattaccggtccaccaggaccattgtggaaatttgcaaccagttctgccagtta
gatcccaggttccagccagccagggtaaagggtaaaccacccattgaagctgaaagaaaa
aaagactacattaacttcccggtactgggactcttccgtgatgatctacccaccctggcc
cgtgatctatccgaattcatacacaaagtattaaaccaaggatactccttctcccatgaa
ggggaaaaatacacaatacgggccgatccccaggagggaagtcctgctgatttatcagta
ctaatgagttcacccctggaattatccagtagtggtaaaccccgattacccttactttta
agaaaaaatctccagaaatatgaccttaatgttttcaatccccggggaagtgacctggaa
agagcctggcaaactgccctgctctgcgggttgatcatggaatgtattgacccccagtgc
caggtacaagataccattgagaagttacccagccaggctaaacacaacttcgctgtatgg
aggaataaagccagggaatactgggaagaagacccggaaccagtcaagccattatccctt
aaacgatttgttgatgcctggcaaaacagaacacccattggtaggagtaaatggaagagc
aatgtacccctgattgaactgacctatcaactggtaacctggatacctcaccttaagaat
gatgtggagagtctggtgtacctggaggcggtgacccgtaccatgtcccagactggtatc
ttcaacaatttcgggggtgaaatactccattatgatgatgaagaattgaaccaggcctcg
gtgagggaggccatatggaacatactggtgcctttagccactggtgccatagaggtggat
gaggggctactggaaactcttcctgacgaccggattaacattatgagcatccaccaggcc
aagggactggaatttcccctggttattgtggatgttggttcggatttttcaaaaaattac
cctgcccaggaattcaaacgattcccccgtgagggtgggaaaccctgcaacatggaagat
gaactcagaacttgctcacccctggaggaacctgatagatcccctcgtgaccgggccttt
gatgaccttataagacagtattttgtggccttcagccgccctcaggatgttcttttgttg
gtgggattagagagtgtcaaggatggttatcataccaagcagggacctcgaagaatagca
aacgtggctacaggctggtcccgagatggtaaatggcactggccacgtttggaaaatata
aaacatatctaa
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