Methanobacterium sp. BAmetb5: CIT02_03785
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Entry
CIT02_03785 CDS
T05745
Name
(GenBank) DEAD/DEAH box helicase
KO
K03725
putative ATP-dependent RNA helicase [EC:5.6.2.-]
Organism
meto
Methanobacterium sp. BAmetb5
Brite
KEGG Orthology (KO) [BR:
meto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
meto03019
]
CIT02_03785
Messenger RNA biogenesis [BR:
meto03019
]
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Others
CIT02_03785
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Ortholog
Paralog
GFIT
Motif
Pfam:
DUF5814
DEAD
Helicase_C
ResIII
SecA_DEAD
DEXQc_Suv3
Motif
Other DBs
NCBI-ProteinID:
AXV39495
LinkDB
All DBs
Position
complement(801501..803990)
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AA seq
829 aa
AA seq
DB search
MIILRRKKKIVELFPIGSSKGALNSRRKPLFHGYIKFRRVDGQLKIHKFIVKKDKETILP
PSEAIKILRKQNIFLVGKDQDTEEFLQSLNIKYNHTLICRHCTFEGFITLIQRDKSYSYH
GDHLCRLCAESEIKRELKAHSYDLSTFSRFRKMLDETGDLAKVLSVFDPRFDPLKHQELT
LYDKITTRKSNIPQIRIDQLKIPEKFKKALKTQGTHLLPVQVLALQAGLLEEENLLVVSA
TASGKTLIGELAGIPHALEGGKFLFLTPLVALANQKYRDFKKRYQKLGLKVSIRVGMSQI
KAKEELTLPDEKIDAADIVVGTYEGLDFLLRAGRSSQLGNLKTVVVDEIHMLGDDERGPR
LRGLIHRLKSIFPDLQVIGLSATVQNPQEIATEFGMKLVQYPLRPVPLERHLIFTRTEEE
KNHLLTQLSRNEYQNRSKKGYHGQSIIFTNSRRKTHSVADYLTRRGVKAAAYHAGLSYSK
KNRIERDFGGQKLGAVVTTAALAAGVDFPASQVLFESLTMGNKTLTPNEFSQMLGRAGRP
TYHDQGKVYLLPEIGRSYGDETEEMQAMELLSSDVEAVNVTYSEDSQVEQFLADICAGRA
DKFSQIGQEYANEELPLEFEEAFNLMVDYGLVKEMDGKVTPTRYGRAVSMSFLSHFCAEY
IRKNLDRMHPMDIALKLEPFESAYLSSRITTQMSRILKINMSTRLFADSTLDILSSGTAL
NKLEPRLRERLMKLQMDFYTCKCKDRPFCGCFQRELSRRMVKQRLSKRDPVDISRKLMRD
YEIHAYAGDIFSWLDSLIRMLEAVRRIAQAFGRKKVVGECNRLIRQIEN
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgataattttaaggcgtaaaaagaagattgtagaattattccccattggaagttccaaa
ggggctttgaatagccggagaaaacctttattccatggttatattaagtttcgccgggtg
gatggccagctgaagatccataagttcatagtaaaaaaggataaggaaactattctacct
cccagtgaggccataaagatcctgaggaagcagaacattttcctcgtgggcaaggaccag
gatactgaagaattcctccagtcattgaatataaaatataatcacaccttaatatgccgg
cactgcaccttcgaaggttttatcaccctcatacagagggacaaatcatattcatatcac
ggagatcatctgtgccgtttatgcgcagaatcagagataaaaagggaattaaaggcccat
tcctatgacctgagcactttttcccgtttcaggaagatgctggatgagactggtgatctg
gccaaggtgttgagtgtttttgacccccgcttcgacccactcaaacaccaggaactcact
ctgtacgataaaataaccaccagaaaatctaacatcccacaaatcagaattgaccagtta
aaaatcccggaaaaatttaaaaaagctctgaaaacccaggggactcatctcctccctgtt
caggtgctggcactccaggccggactcctggaagaagagaacctcctggtggtatccgcc
actgccagtggaaaaacattaatcggggaactggcaggcataccccacgccctggaaggg
ggtaaatttctctttttaacccctctggtggctctggccaatcagaagtaccgtgatttc
aagaaaagataccagaaattgggattgaaggtctccataagagtggggatgagtcagata
aaggccaaagaagagctcactctgcccgatgaaaagatagatgctgcggatatagtggtg
gggacctatgaaggtctggacttcctcctccgtgcagggagatcatcccaactgggaaac
cttaaaaccgtggtggtggatgagatccatatgctgggggatgatgagcggggtccccga
ttaaggggactcattcaccggttgaaatcaattttccctgacctgcaggtcatcggactt
tcagctacggtgcaaaacccccaggagatagccacggagtttggcatgaagctggtccag
taccccctgagaccggttcccctggagagacacctcatattcacccgcactgaggaggag
aagaaccatcttctaactcaactatctcgtaatgaataccagaaccgatcaaaaaagggg
taccatggtcagagtattattttcaccaattcacgccggaaaacccatagtgtggctgat
tatctgacccggagaggtgttaaggcagcagcataccatgctgggctgtcctactccaaa
aagaaccggattgaaagggattttggggggcaaaagttgggggcagtggttaccacggct
gcgttagccgcgggagtggattttcctgcatcccaagtactttttgaaagtttaaccatg
gggaacaagacactcacccccaatgagttctcccagatgctgggcagggcaggaagaccc
acctaccatgaccagggaaaagtgtatctcttgccagagattggtcgtagttacggtgat
gaaaccgaggaaatgcaggccatggaactcttatccagtgatgtggaagcagtgaatgta
acctactctgaggacagtcaggtggaacagttcctggcagatatctgtgctgggcgtgcc
gataaattcagtcaaataggccaggaatatgccaatgaagagctacccctagaatttgag
gaagcattcaacctaatggtggattatggtctggtaaaggagatggatggcaaggtaacc
cccaccagatatgggagggcggtttccatgtctttcctgtcacatttctgtgctgagtac
atccgaaagaacctggatcgtatgcatcccatggatatagcccttaaactggaaccattt
gaaagtgcctatctttccagcaggataaccacccagatgagccgtattctcaagataaat
atgtccacccgcttatttgctgacagcaccctggatattttgagttcgggcacagccctt
aacaaactggagccccgcctcagggaaagattgatgaagctccagatggatttttacacc
tgtaaatgtaaggataggccattttgtggatgtttccagagggaactatcccggagaatg
gttaaacaacgcctgtcaaaacgggatccagtggatataagtcggaagttgatgcgtgac
tacgagatacacgcttatgccggggacatattcagctggctggactcacttataaggatg
ctggaggcagtgcggagaatagcccaggcctttggaagaaaaaaagtggtgggggaatgt
aatcgtttgatacggcagattgaaaactaa
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