Methanobacterium sp. BAmetb5: CIT02_03850
Help
Entry
CIT02_03850 CDS
T05745
Name
(GenBank) single-stranded DNA-binding protein
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
meto
Methanobacterium sp. BAmetb5
Pathway
meto03410
Base excision repair
meto03430
Mismatch repair
meto03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
meto00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CIT02_03850
03430 Mismatch repair
CIT02_03850
03440 Homologous recombination
CIT02_03850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
meto03400
]
CIT02_03850
DNA repair and recombination proteins [BR:
meto03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
CIT02_03850
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CIT02_03850
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CIT02_03850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH_CID
DHHA1
DHH
Motif
Other DBs
NCBI-ProteinID:
AXV39507
UniProt:
A0A347AKL0
LinkDB
All DBs
Position
814367..815764
Genome browser
AA seq
465 aa
AA seq
DB search
MAVNRDYLDKSLAKANEMVKKAEDIKIYSHIDCDGISSGAILSATLDRLEIDHEIEFISL
DRIPELEKKNELTIFSDLGSGQDLDHFVTSQSKVLVLDHHPPLRNISPVGSGFLEVNPNH
YGLDGSHQVSGGGMCYLLARTFGFYDLSWIGVLSAIGDMQNNLSGKLVGLNKEILDDGAK
LNLVESINDLAIYGRQTRPLFVALSYFGDVKLPITNNRNESIQFLKNLDIPINNGKKQRT
LYDLSQAEKGRIFSELVRMLSREVPPRYVRYIPRLVAGDAYEFLREEKYSPLRDASEFST
AINACSRHQNPEVALKVLKGDRGMALDEMEAQGKEHRRYLAQKMNWIQGEDRIQNMTNLQ
YFHGNGIKSEVVGTIAGMVLSYGDWRKPMIGFTRINDENEGLKVSLRCSRLLAFDGIHFG
HMISQVAAKVGGSGGGHSVACGAYIPGDKQDKFLELFNEQLNGVL
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atggcggttaacagggattatctggataaatcactggctaaagctaatgaaatggtcaaa
aaggcagaagatattaaaatatacagccatatagactgtgacggaatatcttccggagca
atactgtctgcaactctggaccgtctggagatagatcatgaaatagagttcataagcctg
gaccggattcccgaactggaaaagaaaaatgaactcaccatattctcagacctgggttca
ggacaagatttagaccatttcgttacatcccaatccaaggttctagttctggaccatcac
cccccactgcgaaatatatcaccagtgggaagtgggtttctggaggtgaaccccaaccac
tatggtctggatggttcgcatcaggtttcagggggaggtatgtgctacctcctggccaga
acattcggtttttatgatctaagctggataggtgttttgagtgccatcggggatatgcag
aacaatttatccgggaagttagtagggcttaataaagaaatactggatgacggggcgaag
ttgaacctggtagagtcaattaatgatctggccatttacggacgccaaacccggccactg
ttcgtggccttatcctattttggtgatgttaaactacccatcaccaacaaccgcaatgaa
tccatccagtttttaaagaatctggacatacccattaacaatgggaaaaaacagcgcaca
ctttacgatctaagccaggcggaaaagggaaggatcttctccgagctggtacggatgtta
agccgtgaggtaccccctcgctatgtccgttacattccccgcctggtggctggcgatgcc
tacgagttcttgagggaggaaaagtattcccccctgcgtgatgccagtgaattttcaacg
gccatcaacgcctgcagccgacaccaaaatccagaggtggccttaaaggttcttaaggga
gaccgaggtatggccttggatgagatggaagcccaggggaaggagcaccgccgttacctg
gcccaaaaaatgaactggatccagggggaagaccggatccagaacatgactaacttgcag
tacttccatggtaacggaataaaaagtgaggtggtgggaaccatagctggtatggtccta
agttacggtgactggagaaagcccatgattggttttactcggataaacgatgaaaacgaa
ggcttaaaggtttctttacgttgttcccgtctcttggcatttgatggaatccacttcggc
catatgatcagccaggtggctgccaaggtagggggaagtggtggtggccactctgtagcg
tgcggtgcctacatccccggggataaacaggataaatttctggaactcttcaacgaacaa
ttgaacggtgttctgtaa
DBGET
integrated database retrieval system
