KEGG   Methanobacterium sp. BAmetb5: CIT02_04530
Entry
CIT02_04530       CDS       T05745                                 
Symbol
tfe
Name
(GenBank) transcription factor E
  KO
K03136  transcription initiation factor TFIIE subunit alpha
Organism
meto  Methanobacterium sp. BAmetb5
Pathway
meto03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:meto00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    CIT02_04530 (tfe)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:meto03021]
    CIT02_04530 (tfe)
Transcription machinery [BR:meto03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIE
     CIT02_04530 (tfe)
 Prokaryotic type
  Archaeal type
    TFE
     CIT02_04530 (tfe)
SSDB
Motif
Pfam: TFIIE_alpha HTH_Cmi2_C Zn_Ribbon_TF DUF7342 HypA TrmB HTH_NPRL3 Rrf2 IBR Sigma70_r3 HTH_5 zf-UDP
Other DBs
NCBI-ProteinID: AXV39628
UniProt: A0A347AKY1
LinkDB
Position
complement(951761..952246)
AA seq 161 aa
MLADPNVQEILIDVTKDDENSIPIIQCLLNGKTTDEEIAEETEIRLNIVRRILYKLYDAG
VASYKRSKDPETQWYTYSWKFEEDKISEIISDKVEKFSQELHQSLEYEEDNMFFVCPNGC
RYNFEEASERNFICPDCNTNMEFQDNSSIIMELKELQERMS
NT seq 486 nt   +upstreamnt  +downstreamnt
atgctcgcagatcccaatgtgcaggaaattctcattgatgttactaaagatgatgagaat
agcatccccattattcaatgtctattgaatggtaaaaccaccgatgaggaaattgctgaa
gaaactgaaatcagacttaacattgtgagaagaatactttataagttatatgatgccggc
gtggccagctacaagagaagtaaagaccctgaaacccagtggtatacttacagctggaaa
tttgaggaagataaaatctcggaaatcatatcagataaggttgaaaagttctcccaggaa
cttcaccagtcactggaatacgaagaagacaacatgttttttgtctgtcccaatggttgt
cgctataattttgaagaggcatcagaaagaaacttcatatgcccggactgcaacaccaac
atggagttccaggataattcatcaataattatggaattaaaggaattacaggaaaggatg
agctaa

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