KEGG   Methanobacterium sp. BAmetb5: CIT02_04575
Entry
CIT02_04575       CDS       T05745                                 
Name
(GenBank) transcription elongation factor Spt5
  KO
K15172  transcription elongation factor SPT5
Organism
meto  Methanobacterium sp. BAmetb5
Brite
KEGG Orthology (KO) [BR:meto00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    CIT02_04575
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:meto03021]
    CIT02_04575
   03019 Messenger RNA biogenesis [BR:meto03019]
    CIT02_04575
Transcription machinery [BR:meto03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription elongation factors
     CIT02_04575
  RNA polymerase I system
     CIT02_04575
Messenger RNA biogenesis [BR:meto03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    DRB sensitivity inducing factor (DSIF) complex
     CIT02_04575
SSDB
Motif
Pfam: Spt5-NGN KOW KOW1_SPT5 DUF411 KOW4_SPT5
Other DBs
NCBI-ProteinID: AXV39635
UniProt: A0A347AKY8
LinkDB
Position
959522..959965
AA seq 147 aa
MIYAIRTLVGQEKNVARIIARNVKDSGIGVSAVLVPESLRGYILVESSTKIDLQNPAFKV
PHMKGAIEGDIPYDEIKSFLKPEPIIASIQKGSIVELISGPFKGEKAKVVRIDESREDVV
LELIEAAVPIPVTVKGDQIRLIQKEAD
NT seq 444 nt   +upstreamnt  +downstreamnt
ttgatctatgcaataagaaccctggttggccaggaaaaaaacgtggccaggataattgcc
aggaatgttaaagatagtgggattggagttagtgccgtgctggttccagagagtttacgt
ggatatatactcgtagagtcatccacaaagattgatctgcaaaacccggcatttaaggtg
ccgcatatgaaaggagccatagaaggagacatcccctatgatgagataaaaagcttttta
aagccggaaccaataatagcttccatacagaagggaagtattgtggaactgatatccgga
ccattcaaaggcgaaaaagccaaagtggttcgtattgatgaatccagagaagatgtggtt
ctggagcttattgaagcagcagttcctatccccgttaccgttaaaggtgatcagattaga
ttaatacagaaggaggcagattaa

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