Methanobacterium sp. BAmetb5: CIT02_04885
Help
Entry
CIT02_04885 CDS
T05745
Symbol
tfb
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
meto
Methanobacterium sp. BAmetb5
Pathway
meto03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
meto00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CIT02_04885 (tfb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
meto03021
]
CIT02_04885 (tfb)
Transcription machinery [BR:
meto03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
CIT02_04885 (tfb)
Prokaryotic type
Archaeal type
TFB
CIT02_04885 (tfb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Ribosomal_S27e
Sigma70_r4
Lar_restr_allev
Zn_ribbon_LysW
RPA_interact_C
HTH_Tnp_ISL3
BRF2-like_C_cyclin_rpt
UPF0181
Cyclin_C
Cas_Cas5d
A2L_zn_ribbon
Zn_ribbon_tTFIIB
Zn_Ribbon_YjdM
Zn_ribbon_PaaD
Motif
Other DBs
NCBI-ProteinID:
AXV39690
UniProt:
A0A347AL43
LinkDB
All DBs
Position
1020005..1020940
Genome browser
AA seq
311 aa
AA seq
DB search
MKQDMSEIEKIETRCPECQSEKLINDHERGEIVCGSCGLVIDDNLVDMGPEWRAFDHEQR
DKRTRVGAPITYTIHDKGLSTMIDWRNKDIYGRDIPARNRAQWYRLRKWQRKIRISGATE
RNLAFALSELDRDSSRLGLPRSVREAASVVYRNAVENKLIRGRSIEGVVAASLYAACRRC
NVPRTLDEIAEVSRVSKKEVGRTYRFLTRELNIKLPPTSPVDYVPRFASELNLSGEVQSK
AIEIIEKAMEKGLTSGRGPTGVAAAALYIASVLLGERKTQRDVADIAGVTEVTIRNRYKE
LTEQLDMGVTL
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaggatatgtctgagattgaaaaaatcgagaccagatgtcctgaatgtcaatct
gaaaaactcataaatgatcatgaacgaggagaaattgtctgcggctcctgcggtctggtt
attgatgacaacctggtggacatgggtccggaatggagggcctttgaccacgaacaaagg
gataaaaggacccgtgtaggtgcacctattacctacactatccacgataagggtctttcc
accatgatcgactggagaaacaaggatatttacggtcgtgacatccccgccaggaaccga
gcccagtggtaccggctccgtaaatggcagaggaaaatccgtatttccggtgcaaccgaa
cgtaacctggcctttgccctctcggaactggatcgtgattcatcccgattgggacttccc
cgtagtgttagggaagcagcatcagtagtttaccgtaacgcagtggaaaacaaactcatc
agaggaagaagcattgaaggagtggttgcagcatcactttacgctgcctgccgacgttgc
aatgttccccgaactctggatgaaattgccgaagtatccagggtaagtaagaaagaagtg
ggtagaacctaccgtttccttaccagggaactgaacatcaagttaccacctaccagtccc
gtggattacgtgcctcgctttgccagtgaattgaacctctcaggagaagtccagtccaaa
gccatagagatcattgaaaaagcaatggaaaaaggtttaacctcgggaagaggacctacc
ggagttgctgccgctgccctgtacatcgcttcagtgttactcggtgagagaaaaacccag
cgtgatgtggcagatattgcaggagttaccgaagttaccatccgtaaccgatacaaggaa
ctcacagaacaattagacatgggtgttacactctaa
DBGET
integrated database retrieval system
