KEGG   Methanobacterium sp. BAmetb5: CIT02_05000
Entry
CIT02_05000       CDS       T05745                                 
Name
(GenBank) hypothetical protein
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
meto  Methanobacterium sp. BAmetb5
Brite
KEGG Orthology (KO) [BR:meto00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:meto02048]
    CIT02_05000
Enzymes [BR:meto01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CIT02_05000
Prokaryotic defense system [BR:meto02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    CIT02_05000
SSDB
Motif
Pfam: Cas3-like_C_2 DEAD ResIII Helicase_C HD Cas3_HD CTD6
Other DBs
NCBI-ProteinID: AXV39712
UniProt: A0A347AL65
LinkDB
Position
1041669..1044257
AA seq 862 aa
MSCWNKLEDLLQLKLVLFGGLEKKMSFSYKLKSHPEKRLVDHLCNVAKLSKNIVNSKIIE
NKDLISKIAYLNGISHDFGKSTTFFQIYIHNHEKNSKFTYHSFVSSFFGYYLVKDYLKKN
GVYDEFWYLPAISWIVINKHHGNIKNLKHNEIPKLNENNKIDVVVEQIKDINKNHLDEIN
HIYEDILSYSEIQDFFHVLITKNPKFTEDIRSNVKKLFREKKLEYYFWILFFYSILLDAD
KLDASETPIPKRVEILEKDLVDQYKAVKFKDHEKINQIREMAYQEVNSQLPEIDLRKDRI
FSINLPTGVGKTLTSFSFALGLQDKVQDEKGFNPKIIYSLPFLSIIDQNSSVISEILAGR
DGKGWEQLFEMDKEEKEKYVEENTPSNLLLKHHHLIDIKYKEEKNNELNVIENINKSLLL
TEGWHSEVVITTFIQFFHSLITNKNRAARKFHNMINSIIILDEIQAIPNGYWLLLNNMLK
YLASKFNCWIILITATKPLIFDKKEIKELVKNRDMYFEAFDRVNFNFDLNEKDFDDFKEE
IFDEIIEKKDNDIMVVLNTINSAKELYNHLKERLSEEYKLTDKERLVDNDGICKFNGFEL
INMTTHVLPRYRLKRIDRIKHDKKRKIIITTQLVEAGVDVSVDIIYRDLAPLDSIIQTAG
RCNRNDEGKKGSFNTIVLKDENKRFHEYVYDSVLIDATKEIMTRTGGSISEKDFTMNAAD
EYYRLIKERGSYDDSRQIMEHLIRLEFSDTSKFQLIKNDIPKTSVFIEINEEAKKIREYM
EEIQTELKRFERKNKLLEIKKDINLFTLSISCNKKMEDEIGHLPYIGRIEDYKYVPKKDL
EEWYRLDVGFCPPTNDIDMRMI
NT seq 2589 nt   +upstreamnt  +downstreamnt
atgtcttgttggaacaaactggaagacctattacaattgaaactggttctttttggagga
ttggagaagaaaatgtcattttcttataaattgaaatctcaccctgaaaagagattagta
gaccatctttgtaacgttgccaaattatctaaaaatattgtaaattcaaaaattattgaa
aataaagatttaatatccaaaatagcttacttaaatggcatttcacatgattttggaaag
tctactactttttttcagatatatatccataaccatgaaaaaaatagcaaatttacatat
catagtttcgtttcatcattttttggatattatttagtaaaagattatttaaaaaaaaac
ggagtatatgatgaattttggtatttacctgcaatttcgtggattgttataaacaaacat
catgggaatattaaaaacttaaagcataatgaaattcctaaacttaatgagaataataaa
attgatgtggttgttgaacaaataaaagatataaataaaaaccatttagacgaaataaac
catatttacgaagatatattgtcttattctgaaatacaagacttttttcatgtattaata
actaaaaacccaaaatttacagaagatatacgtagcaatgttaaaaagctatttagagag
aaaaagttagaatattacttttggattctctttttttattctattttactcgatgcagat
aaactagatgcttccgaaactccaattcctaaaagagttgaaatactagaaaaagattta
gtagatcagtataaagctgttaaatttaaagatcacgagaaaatcaatcagataagagaa
atggcttatcaagaagtaaattcgcagcttccagaaatagatttaagaaaagacagaata
ttttcaataaatcttcccacgggggttgggaaaacattaactagtttttcatttgcttta
ggtcttcaggataaagttcaggacgaaaaaggttttaatccaaaaataatatattcattg
ccatttttgagtattatcgatcaaaacagttcagttatttctgaaattttagctggaaga
gatggtaaagggtgggaacaattatttgaaatggataaagaggaaaaagagaaatatgtt
gaagagaatacaccttcaaatttacttttaaagcatcatcatttaattgatatcaaatat
aaagaagaaaaaaataatgaactcaatgttattgaaaatataaataaatcattgcttcta
actgaaggttggcattctgaagtagttattacaacttttatccagttttttcacagttta
attaccaataagaatagagcggctagaaaatttcataatatgattaactctataattatt
ttagatgagatacaggcaattccaaatggatactggcttttgttaaataacatgttgaaa
tatcttgcatcaaaatttaattgttggatcatattaataacagccaccaaaccacttatt
tttgacaaaaaagaaatcaaagaacttgtaaaaaatagagatatgtactttgaagccttc
gatagagttaattttaattttgatttaaatgaaaaagattttgatgattttaaagaagaa
attttcgacgaaattattgaaaaaaaagacaatgacattatggtagtgttaaacacgatt
aattctgctaaagagttatataatcatttaaaagaaagactttctgaagaatataaacta
actgataaggaaagacttgtagataacgatggaatttgtaagttcaatgggtttgaactt
ataaatatgactactcatgttctgccgagatatcgtctaaaaaggattgatcgcattaaa
catgataaaaaaaggaaaattattataacaacacaattagtagaagcaggcgtagatgtc
agcgtagacattatttatcgtgatttagcacctttagattcaataatccagacagcagga
cgatgcaatagaaatgatgaagggaaaaaaggttcatttaatacgattgtattgaaagat
gaaaacaaaagatttcatgaatatgtctatgattctgtcctcattgatgctaccaaagaa
atcatgactagaacgggtggaagtatatccgaaaaagatttcactatgaatgcagctgat
gaatattaccgtttaattaaagaaagaggtagttatgatgattctaggcagattatggaa
catttaatacgattagaattttccgacacttctaaattccaattaattaaaaacgacata
ccaaaaacatccgtttttatagaaattaatgaagaagctaaaaaaatcagggaatacatg
gaagaaatacaaacagaattgaaaagattcgaaagaaaaaataagcttttagaaataaaa
aaggacattaatttatttacactatcaattagttgtaataaaaaaatggaagatgaaata
gggcatttaccttacattggaagaattgaagattataaatatgttcctaaaaaggattta
gaagaatggtacagattagatgtggggttttgtccacccacaaatgatattgacatgaga
atgatttaa

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