Methanobacterium sp. BAmetb5: CIT02_05340
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Entry
CIT02_05340 CDS
T05745
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
meto
Methanobacterium sp. BAmetb5
Pathway
meto00521
Streptomycin biosynthesis
meto00523
Polyketide sugar unit biosynthesis
meto00525
Acarbose and validamycin biosynthesis
meto00541
Biosynthesis of various nucleotide sugars
meto01100
Metabolic pathways
meto01110
Biosynthesis of secondary metabolites
meto01250
Biosynthesis of nucleotide sugars
Module
meto_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
meto00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
CIT02_05340 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
CIT02_05340 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
CIT02_05340 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
CIT02_05340 (rfbB)
00525 Acarbose and validamycin biosynthesis
CIT02_05340 (rfbB)
Enzymes [BR:
meto01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
CIT02_05340 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
NAD_binding_10
Sacchrp_dh_NADP
adh_short
NmrA
KR
Ldh_1_N
DapB_N
Slo-like_RCK
NAD_binding_8
Motif
Other DBs
NCBI-ProteinID:
AXV39775
UniProt:
A0A347ALC8
LinkDB
All DBs
Position
complement(1116595..1117530)
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AA seq
311 aa
AA seq
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MKIMITGGAGFIGSNFVHHLCENEDYEVLVLDKLTYAGDMENLKEVRDKIEFVKGDIADE
ELVSKIMKDCDMVVNFAAETHVDRSIEDPGVFVKTDVIGTYNLLENVRKYDVERYLQIST
DEVYGSIESGSFTEENNLDPSSPYSASKAGGDLLVGAYWRTYNTPIIITRSSNNFGPRQY
PEKLIPLFILNAMQDKSLPIYGDGKNVRDWIYVMDNCQGIETALTKGKLGEVYNIGGGNE
KNNLEITHLILELLDKPESLITFVEDRLGHDRRYSLDSTKTMKLGWKPQFSFEEALKETV
EWYKENYSRYL
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgaagataatgattaccggtggtgcaggattcattggatccaacttcgtacaccaccta
tgtgagaatgaagattatgaggtcctggtcctggacaagttaacctatgctggcgacatg
gagaacctgaaggaagttcgtgacaaaattgaattcgttaaaggggacatagccgacgag
gaactggtctccaagataatgaaagactgtgacatggtggtaaacttcgcggccgagacc
catgtggaccgttccattgaggatcccggagtattcgttaaaaccgatgttatagggact
tacaacctcctggaaaatgtccgtaagtacgatgtggaacgttacctgcagatatccacc
gacgaagtctacggtagcatagaatcagggtcatttactgaagaaaataacctggacccc
tccagtccctactccgccagtaaagcgggtggtgaccttctggtaggtgcttactggagg
acctacaacacccccataatcatcacccggagcagtaacaacttcgggccacgccagtac
ccggaaaagttgatacctcttttcatcctcaacgcaatgcaggataaatccttaccaatt
tatggggatggtaaaaacgtccgggactggatatacgtcatggacaactgtcaaggaata
gaaactgctctaactaagggtaaactgggagaagtctacaacatcggtggtggaaacgag
aaaaacaatctggaaataacccacctcatactggaactgttggacaaaccagaaagtctg
atcaccttcgtggaagaccggctgggccatgaccggcgttactctcttgactctaccaag
actatgaaattaggatggaagccccagttctcatttgaagaggccttaaaagaaacagtg
gaatggtataaagagaactattcccgttacctctaa
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