KEGG   Methanobacterium sp. BAmetb5: CIT02_05340
Entry
CIT02_05340       CDS       T05745                                 
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
meto  Methanobacterium sp. BAmetb5
Pathway
meto00521  Streptomycin biosynthesis
meto00523  Polyketide sugar unit biosynthesis
meto00525  Acarbose and validamycin biosynthesis
meto00541  Biosynthesis of various nucleotide sugars
meto01100  Metabolic pathways
meto01110  Biosynthesis of secondary metabolites
meto01250  Biosynthesis of nucleotide sugars
Module
meto_M00793  dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:meto00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 Biosynthesis of various nucleotide sugars
    CIT02_05340 (rfbB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    CIT02_05340 (rfbB)
   01055 Biosynthesis of vancomycin group antibiotics
    CIT02_05340 (rfbB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    CIT02_05340 (rfbB)
   00525 Acarbose and validamycin biosynthesis
    CIT02_05340 (rfbB)
Enzymes [BR:meto01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     CIT02_05340 (rfbB)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase Polysacc_synt_2 3Beta_HSD RmlD_sub_bind NAD_binding_4 NAD_binding_10 Sacchrp_dh_NADP adh_short NmrA KR Ldh_1_N DapB_N Slo-like_RCK NAD_binding_8
Other DBs
NCBI-ProteinID: AXV39775
UniProt: A0A347ALC8
LinkDB
Position
complement(1116595..1117530)
AA seq 311 aa
MKIMITGGAGFIGSNFVHHLCENEDYEVLVLDKLTYAGDMENLKEVRDKIEFVKGDIADE
ELVSKIMKDCDMVVNFAAETHVDRSIEDPGVFVKTDVIGTYNLLENVRKYDVERYLQIST
DEVYGSIESGSFTEENNLDPSSPYSASKAGGDLLVGAYWRTYNTPIIITRSSNNFGPRQY
PEKLIPLFILNAMQDKSLPIYGDGKNVRDWIYVMDNCQGIETALTKGKLGEVYNIGGGNE
KNNLEITHLILELLDKPESLITFVEDRLGHDRRYSLDSTKTMKLGWKPQFSFEEALKETV
EWYKENYSRYL
NT seq 936 nt   +upstreamnt  +downstreamnt
atgaagataatgattaccggtggtgcaggattcattggatccaacttcgtacaccaccta
tgtgagaatgaagattatgaggtcctggtcctggacaagttaacctatgctggcgacatg
gagaacctgaaggaagttcgtgacaaaattgaattcgttaaaggggacatagccgacgag
gaactggtctccaagataatgaaagactgtgacatggtggtaaacttcgcggccgagacc
catgtggaccgttccattgaggatcccggagtattcgttaaaaccgatgttatagggact
tacaacctcctggaaaatgtccgtaagtacgatgtggaacgttacctgcagatatccacc
gacgaagtctacggtagcatagaatcagggtcatttactgaagaaaataacctggacccc
tccagtccctactccgccagtaaagcgggtggtgaccttctggtaggtgcttactggagg
acctacaacacccccataatcatcacccggagcagtaacaacttcgggccacgccagtac
ccggaaaagttgatacctcttttcatcctcaacgcaatgcaggataaatccttaccaatt
tatggggatggtaaaaacgtccgggactggatatacgtcatggacaactgtcaaggaata
gaaactgctctaactaagggtaaactgggagaagtctacaacatcggtggtggaaacgag
aaaaacaatctggaaataacccacctcatactggaactgttggacaaaccagaaagtctg
atcaccttcgtggaagaccggctgggccatgaccggcgttactctcttgactctaccaag
actatgaaattaggatggaagccccagttctcatttgaagaggccttaaaagaaacagtg
gaatggtataaagagaactattcccgttacctctaa

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