Methanobacterium sp. BAmetb5: CIT02_05450
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Entry
CIT02_05450 CDS
T05745
Symbol
fen
Name
(GenBank) flap endonuclease-1
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
meto
Methanobacterium sp. BAmetb5
Pathway
meto03030
DNA replication
meto03410
Base excision repair
meto03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
meto00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CIT02_05450 (fen)
03410 Base excision repair
CIT02_05450 (fen)
03450 Non-homologous end-joining
CIT02_05450 (fen)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
meto03032
]
CIT02_05450 (fen)
03400 DNA repair and recombination proteins [BR:
meto03400
]
CIT02_05450 (fen)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
meto04147
]
CIT02_05450 (fen)
DNA replication proteins [BR:
meto03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
CIT02_05450 (fen)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
CIT02_05450 (fen)
DNA repair and recombination proteins [BR:
meto03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
CIT02_05450 (fen)
Exosome [BR:
meto04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
CIT02_05450 (fen)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_I
XPG_N
5_3_exonuc
EMC3_TMCO1
dsRBD2
Motif
Other DBs
NCBI-ProteinID:
AXV39796
UniProt:
A0A347ALE9
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All DBs
Position
1142957..1143943
Genome browser
AA seq
328 aa
AA seq
DB search
MGVKFKDIVSSEEIRFEDLDGKVVALDAANVIYQFLSSIRQLDGTPLKDQNGRVTSHFSG
ILYRTSSLVEKGMKPVYVFDGQSSALKKETQQKRKEIKEESERRWKEALEEGRLDDARKF
AVRSSRMSPEIVEGSKKLLKLMGIPYIQAKGEGEAQASYMVERGDAWCVASQDYDCILFG
APRMVKNLTISGGQASPEIIQLDNILKKLDVTRQQLVDLAIMVGTDFNQGIKGIGAKKGL
KLIKKHGDIYHALEHLDVELDVDPDILRDMFLKHEVESHYQLKWQKANPEEIVDFLCREH
DFSEDRVLTAVDKLKKLETTQSSLEQWF
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgggagtgaaattcaaggatattgtgtcctccgaagaaatcaggtttgaggatcttgat
ggtaaagtggtggctctggatgcagcgaatgttatttaccagtttctttccagtatccgc
cagctagacggcacccccctcaaagaccagaacgggagagtgacctcgcattttagtgga
atactgtatcgtacatcttccctggtagaaaaagggatgaaacctgtttatgtttttgac
gggcagtccagtgctcttaaaaaggagactcaacagaaaagaaaagaaatcaaagaggaa
tcagaacgcagatggaaggaagctctggaagaagggcgtttggatgatgcccgaaaattt
gcggtgagatcttcacgcatgtctcccgaaatcgtggaagggtccaaaaaacttcttaaa
ctcatgggaatcccttatatccaggctaaaggggaaggagaagcccaggcctcttatatg
gtggaacgtggtgatgcctggtgtgtggcctcccaggattacgattgtattctattcgga
gctccccgtatggttaagaacctgaccatcagtggggggcaggcctctccggaaatcatc
cagctggataatatcctgaaaaaactggatgtaacccgtcagcaactggtggatctggcc
ataatggtgggtacggatttcaaccagggaatcaagggtattggggcaaagaagggtttg
aaactcattaaaaaacacggcgacatataccatgccctggaacatctggatgtggagctg
gatgttgatcctgatattttgcgggatatgttcctcaaacatgaagttgaatcccattac
cagttgaaatggcagaaggccaatccggaagaaattgtggatttcttgtgccgagaacat
gatttttccgaggaccgggttttaactgccgtggacaaactgaaaaaactggaaaccacc
caaagcagcctggaacagtggttctag
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