KEGG   Methanobacterium sp. BAmetb5: CIT02_05450
Entry
CIT02_05450       CDS       T05745                                 
Symbol
fen
Name
(GenBank) flap endonuclease-1
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
meto  Methanobacterium sp. BAmetb5
Pathway
meto03030  DNA replication
meto03410  Base excision repair
meto03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:meto00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CIT02_05450 (fen)
   03410 Base excision repair
    CIT02_05450 (fen)
   03450 Non-homologous end-joining
    CIT02_05450 (fen)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:meto03032]
    CIT02_05450 (fen)
   03400 DNA repair and recombination proteins [BR:meto03400]
    CIT02_05450 (fen)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:meto04147]
    CIT02_05450 (fen)
DNA replication proteins [BR:meto03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    CIT02_05450 (fen)
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     CIT02_05450 (fen)
DNA repair and recombination proteins [BR:meto03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     CIT02_05450 (fen)
Exosome [BR:meto04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   CIT02_05450 (fen)
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc EMC3_TMCO1 dsRBD2
Other DBs
NCBI-ProteinID: AXV39796
UniProt: A0A347ALE9
LinkDB
Position
1142957..1143943
AA seq 328 aa
MGVKFKDIVSSEEIRFEDLDGKVVALDAANVIYQFLSSIRQLDGTPLKDQNGRVTSHFSG
ILYRTSSLVEKGMKPVYVFDGQSSALKKETQQKRKEIKEESERRWKEALEEGRLDDARKF
AVRSSRMSPEIVEGSKKLLKLMGIPYIQAKGEGEAQASYMVERGDAWCVASQDYDCILFG
APRMVKNLTISGGQASPEIIQLDNILKKLDVTRQQLVDLAIMVGTDFNQGIKGIGAKKGL
KLIKKHGDIYHALEHLDVELDVDPDILRDMFLKHEVESHYQLKWQKANPEEIVDFLCREH
DFSEDRVLTAVDKLKKLETTQSSLEQWF
NT seq 987 nt   +upstreamnt  +downstreamnt
atgggagtgaaattcaaggatattgtgtcctccgaagaaatcaggtttgaggatcttgat
ggtaaagtggtggctctggatgcagcgaatgttatttaccagtttctttccagtatccgc
cagctagacggcacccccctcaaagaccagaacgggagagtgacctcgcattttagtgga
atactgtatcgtacatcttccctggtagaaaaagggatgaaacctgtttatgtttttgac
gggcagtccagtgctcttaaaaaggagactcaacagaaaagaaaagaaatcaaagaggaa
tcagaacgcagatggaaggaagctctggaagaagggcgtttggatgatgcccgaaaattt
gcggtgagatcttcacgcatgtctcccgaaatcgtggaagggtccaaaaaacttcttaaa
ctcatgggaatcccttatatccaggctaaaggggaaggagaagcccaggcctcttatatg
gtggaacgtggtgatgcctggtgtgtggcctcccaggattacgattgtattctattcgga
gctccccgtatggttaagaacctgaccatcagtggggggcaggcctctccggaaatcatc
cagctggataatatcctgaaaaaactggatgtaacccgtcagcaactggtggatctggcc
ataatggtgggtacggatttcaaccagggaatcaagggtattggggcaaagaagggtttg
aaactcattaaaaaacacggcgacatataccatgccctggaacatctggatgtggagctg
gatgttgatcctgatattttgcgggatatgttcctcaaacatgaagttgaatcccattac
cagttgaaatggcagaaggccaatccggaagaaattgtggatttcttgtgccgagaacat
gatttttccgaggaccgggttttaactgccgtggacaaactgaaaaaactggaaaccacc
caaagcagcctggaacagtggttctag

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