Methanobacterium sp. BAmetb5: CIT02_05845
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Entry
CIT02_05845 CDS
T05745
Symbol
rpoA2
Name
(GenBank) DNA-directed RNA polymerase subunit A''
KO
K03042
DNA-directed RNA polymerase subunit A" [EC:
2.7.7.6
]
Organism
meto
Methanobacterium sp. BAmetb5
Pathway
meto03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
meto00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CIT02_05845 (rpoA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
meto03021
]
CIT02_05845 (rpoA2)
Enzymes [BR:
meto01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CIT02_05845 (rpoA2)
Transcription machinery [BR:
meto03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
CIT02_05845 (rpoA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
POTRA_2
PvuRts1I-like_N
Enkurin
Motif
Other DBs
NCBI-ProteinID:
AXV39867
LinkDB
All DBs
Position
complement(1224482..1225633)
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AA seq
383 aa
AA seq
DB search
MDIEKVEKLVKKKRAKFPEKLIQEIAEAAERHDLDDKELDELVKEIKRAYTRSEVEPGEA
VGTVAAQSVGEPGTQMTMRTFHYAGVAELNVTLGLPRLIEIVDARKKISTPTMAIYFDED
HAADEEFVRTIANRIGKITLNDILKDFNVNYASMNMSVEIDDEQVKEKRLDYEEVLAKIE
KTFKSVEINNNLLSFEPKITDPKHAIRELRLLADKVRDLQISGIKNIGKVVIRKEGQEWV
IHTEGSNLGAVLKMDGVDRVRTTTNDIHEVEKVLGIEAARNSIIHEAQTTMEEQGLTVDV
RHIMLVADMMTADGIVKSIGRHGISGEKASVLARASFEETGKHLLRASIRGEVDHLTGII
ENIIIGQPIPLGTGSVGVIMKEK
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
gtggatatagagaaagttgaaaagctggtcaaaaagaaaagagccaaattcccagaaaaa
cttattcaggaaatagcagaagctgccgaaaggcatgatctggatgataaggaactggat
gaactggtgaaagaaattaaaagagcctacacaaggtcggaagtggagcctggtgaagca
gtaggaacagttgctgcccaatcagtgggagagcccggtactcagatgaccatgcgtacc
tttcactatgctggggtggcagaactaaacgttaccctgggtttaccacgactcattgag
atcgtagatgcccgtaaaaagatatccacaccaaccatggccatatacttcgatgaggac
catgccgctgatgaggagtttgttcggaccatcgctaaccgaattggtaagataactcta
aacgacatcctaaaggacttcaacgtcaactacgccagcatgaatatgagtgtggagata
gatgacgagcaggtgaaggaaaaacgactggactatgaagaggttctggccaagatagag
aaaacttttaaaagtgtagagataaataacaacctgctgagttttgaacctaaaattact
gatcctaaacatgccatcagggaactccgacttttagctgacaaggttcgcgatctccag
attagtggaattaagaacataggaaaggtcgtgatccgaaaagaaggacaggaatgggtt
atacacaccgaaggttcaaacctgggagccgtcctgaaaatggatggtgttgaccgcgtc
agaaccaccaccaacgatattcatgaggtggaaaaggttctgggaatagaagccgcccgt
aattctataatccacgaggcccagaccaccatggaagagcagggactcactgtggatgtg
cggcatatcatgctggtggcagatatgatgaccgccgacggcatagtcaaatccataggc
cgacacggtattagcggtgaaaaggccagtgtactagccagggcatccttcgaggagaca
ggtaaacaccttcttcgagccagcataaggggtgaggtggatcatctcaccggaataatc
gagaacattataatcgggcagccaataccactgggaacaggatcggttggcgtcatcatg
aaagagaaataa
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