Methanobacterium sp. BAmetb5: CIT02_06680
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Entry
CIT02_06680 CDS
T05745
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
meto
Methanobacterium sp. BAmetb5
Brite
KEGG Orthology (KO) [BR:
meto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
meto03016
]
CIT02_06680
Enzymes [BR:
meto01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
CIT02_06680
Transfer RNA biogenesis [BR:
meto03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CIT02_06680
Prokaryotic type
CIT02_06680
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AXV40018
UniProt:
A0A347AM21
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All DBs
Position
complement(1391046..1392299)
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AA seq
417 aa
AA seq
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MLNAETYITSQKGIGGEIRTINEDFYVEEIPETPPSGEGPNTWIWIEKNGRTTLDVVLDI
ARELKINRKQMGFAGMKDKRAITRQWICISNKTPEELQGLEDKLHHVKIINIVPNQKKLR
MGQLIGNKFRLMVRDVGETEPAAQEATKILNELEKRGVPNYYGFQRFGKDRPNTHLVGKA
LIKGGVKDAVDRYIGHPYDTEPRHIQEARRLYDQGELEESLESMPSGMRYEKMMLRTLIK
EKNKRGELVENSYIRALLSLPKPLSRMFVHAYQSYLFNRAVSERSKLGIDQYVEGDILID
NEEHLIHEFSREEINQEIKNFQAHPSSPLYGSKVPLAGGKLGEMEQKILDEENLKLDDFE
VPPMPKLGSHGIRRAMRFRIWDVAAEAMEEGVMLSFSIPKGCYATSVLREVMKKDVY
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttaaacgcagaaacttacataacttctcagaaaggaattgggggcgaaatccgaacc
ataaatgaggatttttacgtggaagaaatcccggaaactccacccagtggtgagggaccc
aacacctggatctggattgaaaaaaacggtagaaccactctggatgttgttctggatatt
gcccgggaacttaaaatcaaccgtaaacagatgggattcgcgggaatgaaagataaaagg
gcaataactcgacaatggatttgtatcagtaataaaacccctgaagaacttcagggactg
gaagataagctccatcatgttaaaataatcaacatagttcctaaccagaagaaattacgt
atggggcagttgatcggaaacaagtttcgtttaatggtgcgcgatgtgggtgaaactgaa
ccagcagctcaggaagcaacaaaaatccttaatgaactggaaaaaaggggagtacccaat
tattatggatttcaacgtttcggtaaggaccggcccaacactcacctggtgggtaaagcc
ctgatcaagggaggtgttaaggatgcagtggaccgctacattggccatccctatgacacc
gagccccgacacattcaggaagcccgcagattgtatgaccagggagaactggaagaatcc
ctggaatcaatgcccagtggaatgagatatgaaaaaatgatgttacgtaccctcattaaa
gaaaaaaataaacggggcgaactggttgagaattcttacatcagagcgttgctgagcctt
cccaaacccctcagccggatgtttgtccacgcgtatcagtcctatctgttcaatcgggca
gtcagtgaacgcagtaaactgggcattgaccagtatgtggaaggggatattctgatcgac
aacgaagaacacctgatccatgaattttcccgggaagaaattaatcaggagataaagaac
ttccaggcccatccttcctcacctctttacggcagtaaagtgcccctggccggtggtaag
ctgggagagatggaacagaaaattttggatgaggaaaaccttaaactggatgatttcgag
gtacctccgatgcctaaactgggcagtcatggcatacgccgggccatgaggttcaggata
tgggatgttgctgccgaggcaatggaagaaggagtaatgttgagtttttccattcccaaa
ggttgctacgctaccagtgttcttcgagaggttatgaagaaagatgtctattga
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