KEGG   Methylibium sp. Pch-M: C1M51_01425
Entry
C1M51_01425       CDS       T05827                                 
Name
(GenBank) exodeoxyribonuclease I
  KO
K01141  exodeoxyribonuclease I [EC:3.1.11.1]
Organism
metp  Methylibium sp. Pch-M
Pathway
metp03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:metp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    C1M51_01425
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:metp03400]
    C1M51_01425
Enzymes [BR:metp01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.1  exodeoxyribonuclease I
     C1M51_01425
DNA repair and recombination proteins [BR:metp03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     C1M51_01425
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     C1M51_01425
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      C1M51_01425
SSDB
Motif
Pfam: Exonuc_X-T_C RNase_T
Other DBs
NCBI-ProteinID: QAZ38189
UniProt: A0A4P6H7E1
LinkDB
Position
complement(308107..309546)
AA seq 479 aa
MSEHSFYWHDYETFGRWPRRDRPAQFAGVRTDAELNEIGSSLMHYCQPAPDFLPDPESCL
LTGILPQTCLEQGLPEHAFAAAIERELAAPGTVGVGYNTIRFDDEVTRHLFWRNLMDPYA
REWQNGCGRWDLLDVVRCTYALRPEGIEWPRHDDGRASFKLEHLTAANGLTHEAAHDALS
DVRATIGLARLIRRHQPRLWDFCFRLHRKDAVMAEIGAGARRPFLHISGMYPAERGCLAA
VWPLGAHPTNKNELIVWDLAADPSELYGLDATAIRQRLFTKAEDLPEGTTRLPIKSIHIN
KSPIVIGNLKTLSPAMAERWGYDAARVQRHADIALAHDTLPRALWAEVFARPAPEQAPDV
DEDLYGGFVSHADRRTLERLRGLPPEGLAGQRPSFEDGRLEELLFRYRARNFPHTLNAEE
RAQWEQHRAERLHLGIGGGSSLAAFFERIDALSESADERGQDILGALYDYAEQIAPPAP
NT seq 1440 nt   +upstreamnt  +downstreamnt
atgagcgaacacagcttctactggcacgactacgaaaccttcgggcgctggccgcggcgc
gaccggccggcgcagttcgccggcgtgcgcaccgacgccgaactcaacgagatcggttcg
tcgctgatgcactactgccagcccgcgcccgatttcctgcccgatcccgaatcctgcctg
ctgaccggcatcctgccgcagacctgcctcgagcagggcctgccggaacatgccttcgcg
gccgccatcgagcgcgagctggcggcgccgggcacggtgggcgtgggctacaacaccatc
cgcttcgacgacgaggtgacgcgccatctgttctggcgcaacctgatggacccctatgcc
cgcgagtggcagaacggctgcgggcgctgggacctgctcgacgtggtgcgctgcacctat
gcgctgcggcccgagggcatcgagtggccgcgccacgacgacggccgcgcctcgttcaag
ctcgagcacctgacggcggccaacggcctgacgcacgaggcggcgcacgatgcgctgtcg
gacgtgcgcgccaccatcggcctggcccggctgatccgccggcaccagccccgcctgtgg
gacttctgcttccggctgcaccgcaaggacgcggtgatggcggagatcggtgccggtgcg
cggcggccctttctgcacatctccggcatgtacccggccgagcggggctgcctcgccgcg
gtgtggccgctcggcgctcacccgaccaacaagaacgaactgatcgtctgggatctggcg
gccgaccccagcgaactctacggactcgatgccaccgcgatccgccagcgcctgttcacc
aaggccgaagatctgccggagggcacgacgcgcctgccgatcaagagcatccatatcaac
aagtcgccgatcgtcatcggcaacctcaagacgctgagcccggcgatggccgagcgctgg
ggctacgacgcggcccgggtgcagcgccacgccgacatcgccctggcgcacgacacgctg
ccgcgcgcgctgtgggcagaagtgttcgcgcggcccgcgcccgagcaggcacccgacgtc
gacgaagacctgtatggcggcttcgtctcccatgccgaccggcgcacgctcgagcggctg
cgtgggctgccgccggaagggctggcgggccagcgcccgtcgttcgaggacgggcgcctg
gaggaactgctgttccgttaccgcgcgcgcaacttcccgcacacgctcaatgccgaggag
cgggcccagtgggagcagcatcgcgccgagcggctgcacctgggcatcggcggcggcagc
agcctggcggccttcttcgaacgcatcgacgcgctcagcgaatcggccgacgagcggggc
caggacatcctgggcgcgctctacgactatgccgagcagatcgcgccgccggccccgtga

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