Methylibium sp. Pch-M: C1M51_01475
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Entry
C1M51_01475 CDS
T05827
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
metp
Methylibium sp. Pch-M
Brite
KEGG Orthology (KO) [BR:
metp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
metp03016
]
C1M51_01475
Enzymes [BR:
metp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
C1M51_01475
Transfer RNA biogenesis [BR:
metp03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
C1M51_01475
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GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
QAZ38198
UniProt:
A0A4P6GVV9
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All DBs
Position
318379..319032
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AA seq
217 aa
AA seq
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MPDQMSLPGVPAEPALFEPEVVRGRAGQLRGYNLFFALVPLPDDAEHLAQVGAELRRRHG
LRGPCLPPQNLHVSLHAVAGYANRIPRSDIDAARAAAARVTWPGSSIVFDRACSFDTAGN
NPFVLRCDAQSDDAVTRLRDTLGDELRRAGLRPKPSRTPHMTLLYDPILVPEHLIEQTEW
IAARFTLILSHQGHGHHERLGGWPSPDEGSRARDSQK
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atgcccgatcaaatgagcctgccaggagtccctgccgagcccgcactgttcgagcctgag
gtcgtccgcgggcgcgcgggccagttgcgtggctacaacctgttctttgcactcgtccct
ctgcctgacgacgcagaacaccttgcacaggtcggcgccgagctgcgcaggcgccacggg
ctgcggggtccgtgcctgccacctcagaacctgcacgtcagcctgcatgcggtcgcgggc
tacgccaacaggatccctcgatcggatatcgacgctgcccgggccgcggctgcccgagtg
acctggccgggttcgtccatcgtgttcgatcgcgcctgcagcttcgacaccgcaggcaac
aaccccttcgtcctgcgctgcgatgctcaaagcgatgacgccgtgacccgactgcgggac
acactgggggacgaactccgccgcgcagggctcaggccgaagccgtcccgcacaccccac
atgacgctgctctatgacccgatactcgtaccagagcacctcatcgaacagaccgaatgg
atcgccgcgcgattcacactgatcctcagccaccaaggccacggacatcacgagaggctg
ggcggttggccatcgcctgatgagggatctcgcgcgcgcgacagccagaaatga
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