Methylibium sp. Pch-M: C1M51_02415
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Entry
C1M51_02415 CDS
T05827
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
metp
Methylibium sp. Pch-M
Pathway
metp03030
DNA replication
metp03410
Base excision repair
metp03420
Nucleotide excision repair
metp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
metp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C1M51_02415
03410 Base excision repair
C1M51_02415
03420 Nucleotide excision repair
C1M51_02415
03440 Homologous recombination
C1M51_02415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
metp03032
]
C1M51_02415
03400 DNA repair and recombination proteins [BR:
metp03400
]
C1M51_02415
Enzymes [BR:
metp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C1M51_02415
DNA replication proteins [BR:
metp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
C1M51_02415
DNA repair and recombination proteins [BR:
metp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
C1M51_02415
NER (nucleotide excision repair)
GGR (global genome repair) factors
C1M51_02415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
QAZ38363
UniProt:
A0A4P6GR00
LinkDB
All DBs
Position
complement(519632..522445)
Genome browser
AA seq
937 aa
AA seq
DB search
MSAHDDSCLLLVDGSSYLYRAYHALPDLRNPAGEPTGAVRGMVAMLKKLREEFPSAHAAC
VFDAKGKTFRDDWYPEYKANRASMPEDLAKQIAPIHQVVRLLGWPVLEIPGIEADDVIGT
LARAAAARGQRVVVSTGDKDLAQLVDAHVTLINTMSGERLDVAGVTEKFGVPPSAIVDYL
TLVGDAVDNVPGVEKVGPKTAAKWIAEHGSLDGVMAAADAIKGVAGENLRKALDWLPLGR
RLVTVKTDCDLSEALPGWNGTAAWDTLTWRETDRAALLAFYTHNDFRAWRNELESARAAA
TPAPQVAAAEAGQGQSALFADPAGTRPADGGGAPAVDKRYETVLTREAFEAWRARIEAAD
LVALDTETDSLDGMRARIVGLSFSVQPHEACYIPLAHTYPGAPDQLPLDEVLAALKSWLE
DGSRAKLGQNVKYDTHVFANHGIAVRGYVHDTLLQSYVLEAHKPHSLESLASRHLDRKGL
SYEDVAGKGAQQIPFAQVELTRATEYSGEDSDMTLDVHRVLWPQLEAAPRLREVYERIEM
PTSVILGRIERHGVLIDSALLARQSAELAQRMVALEQEAHTLAGQPFNLGSPKQIGEILF
NKLGIPAKKKTASGAPSTDEEVLAELAADYPLPAKLLEHRSLAKLKGTYTDKLPLMVNVA
TGRVHTNYAQAVAVTGRLASNDPNLQNIPIRTPEGRRVREAFVAPPGHVILSADYSQIEL
RIMAHISEDPGLLKAFAEGLDVHRATASEVFNVPVAEVSSEQRRYAKVINFGLIYGMGAF
GLASNLGIEQKAAKDYIDRYFARFAGVKRYMDETRARAKELGYVETLFGRRIYLPEINGG
NGPRRTGAERQAINAPMQGTAADLIKLAMIAVQAALDVQQRATRMVMQVHDELVFEVPEA
ELDWARTAVPELMAGVAELKVPLLAEVGVGANWDLAH
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctcacgacgattcctgcctgttactggtggacggttccagctacctctaccgc
gcctaccacgcgctgcccgacctgcgcaatccggccggcgagccgaccggcgcggtgcgc
ggcatggtggcgatgctgaagaagctgcgcgaggagttcccgtcggcccacgcggcctgc
gtgttcgatgccaagggcaagaccttccgcgacgactggtacccggagtacaaggccaac
cgggcctcgatgccggaggacctggcgaagcagatcgcgccgatccaccaggtggtgagg
ctgctgggctggccggtgctcgagatcccgggcatcgaggccgacgacgtgatcggcacg
ctggcgcgggcggcggcggcgcgcggccagcgggtcgtcgtctcgaccggcgacaaggac
ctggcgcagctcgtcgacgcgcacgtgacgctgatcaacacgatgagcggcgagcggctc
gacgtggccggcgtgacagagaagttcggcgtgccgccctccgcaatagtcgactacctg
acgctggtcggcgatgccgtcgacaacgtcccgggggtcgagaaagtgggcccgaagacc
gccgccaagtggatcgccgagcacggctcgctggacggcgtgatggccgcggccgacgcc
atcaagggcgtggccggcgagaacctgcgcaaggcgctggactggctgccgctgggtcgc
cggctggtgaccgtgaagaccgactgcgatctgtcggaggcactgccgggctggaacggc
acggccgcctgggacacgctgacctggcgcgagaccgaccgcgcagccctgctggccttc
tacacgcacaacgatttccgcgcgtggcgcaatgagctcgagtcggcccgtgccgccgcc
acgccggccccgcaagtggcagcggcggaggccgggcaggggcagagcgcgctgttcgcc
gacccggcgggcaccaggccggctgatggtggcggcgcgccggcggtcgacaagcgctac
gagaccgtgctgacgcgcgaggccttcgaggcgtggcgcgcgcgcatcgaggcggccgac
ctggtggcgctggacaccgagaccgactcgctcgatggcatgcgggcacgcatcgtcggc
ctgagcttcagcgtgcagccgcacgaggcctgctacatcccgctggcccacacctacccg
ggcgcgcccgaccagctgccgctcgacgaggtgctggcggcgctgaagtcctggctcgag
gacggctcgcgcgccaagctcggccagaacgtcaagtacgacacccatgtgttcgccaac
cacggcatcgcggtgcgcggctacgtgcacgacaccctgctgcagagctacgtgctggag
gcgcacaagccgcacagcctggagagcctggccagccgccatctcgaccgcaagggcctg
agctacgaggacgtggccggcaagggcgcgcagcagatcccgttcgcgcaggtcgagttg
acgcgcgccaccgagtattcgggcgaggacagcgacatgacgctggacgtgcacagggtc
ctgtggccgcagctcgaggccgcgccgcgcctgcgcgaggtctacgagcgcatcgagatg
ccgacctcggtgatcctcggccgcatcgagcgccacggcgtgctgatcgacagcgcgctg
cttgcgcgccagagcgccgagctggcgcagcgcatggtggcactggagcaggaggcacac
acgctggccgggcagccattcaacctgggcagccccaagcagatcggcgagatcctgttc
aacaagctgggcatcccggcgaagaagaagaccgccagcggcgcgccgagcaccgacgag
gaggtgctggccgagctggcggccgactacccactgccggccaagctgctggagcaccgc
tcgctcgccaagctcaagggcacctacacggacaagctgccgctgatggtgaacgtggcc
accggtcgcgtgcacaccaactacgcgcaggcggtcgcggtgaccggccgactggccagc
aacgaccccaacctgcagaacatcccgatccgcacgcccgagggccggcgcgtgcgcgag
gccttcgtcgcgccgcccggccacgtgatcctgagcgccgactactcgcagatcgagctg
cgcatcatggcccacatctccgaggatccgggcctgctgaaggcctttgccgagggcctg
gacgtgcaccgcgccaccgcgagcgaggtcttcaacgtgccggtggccgaggtcagcagc
gagcagcggcgctatgccaaggtcatcaatttcggcctgatctacggcatgggagccttc
ggcctggcgagcaacctcggcatcgagcagaaggcggcgaaggactacatcgaccgctac
ttcgcgcgcttcgccggcgtgaagcgctacatggacgagacccgcgcgcgggccaaggaa
ctgggctatgtggagacgctgttcggtcgccgcatctacctgcccgagatcaacggcggc
aacggtccgcgccgcaccggcgccgagcgccaggcgatcaacgcgccgatgcagggcacc
gcggccgacctgatcaagctcgcgatgatcgcggtgcaggccgcgctcgacgtgcagcag
cgcgccacgcgcatggtgatgcaggtgcacgacgagctggtgttcgaggtgcccgaggcc
gaactcgactgggcccggaccgccgtgccggaactgatggccggcgtggccgagctgaag
gtgccactgctggccgaggtgggcgtgggcgcgaactgggatctcgctcactga
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