KEGG   Methylibium sp. Pch-M: C1M51_02415
Entry
C1M51_02415       CDS       T05827                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
metp  Methylibium sp. Pch-M
Pathway
metp03030  DNA replication
metp03410  Base excision repair
metp03420  Nucleotide excision repair
metp03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:metp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    C1M51_02415
   03410 Base excision repair
    C1M51_02415
   03420 Nucleotide excision repair
    C1M51_02415
   03440 Homologous recombination
    C1M51_02415
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:metp03032]
    C1M51_02415
   03400 DNA repair and recombination proteins [BR:metp03400]
    C1M51_02415
Enzymes [BR:metp01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     C1M51_02415
DNA replication proteins [BR:metp03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     C1M51_02415
DNA repair and recombination proteins [BR:metp03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     C1M51_02415
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     C1M51_02415
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1
Other DBs
NCBI-ProteinID: QAZ38363
UniProt: A0A4P6GR00
LinkDB
Position
complement(519632..522445)
AA seq 937 aa
MSAHDDSCLLLVDGSSYLYRAYHALPDLRNPAGEPTGAVRGMVAMLKKLREEFPSAHAAC
VFDAKGKTFRDDWYPEYKANRASMPEDLAKQIAPIHQVVRLLGWPVLEIPGIEADDVIGT
LARAAAARGQRVVVSTGDKDLAQLVDAHVTLINTMSGERLDVAGVTEKFGVPPSAIVDYL
TLVGDAVDNVPGVEKVGPKTAAKWIAEHGSLDGVMAAADAIKGVAGENLRKALDWLPLGR
RLVTVKTDCDLSEALPGWNGTAAWDTLTWRETDRAALLAFYTHNDFRAWRNELESARAAA
TPAPQVAAAEAGQGQSALFADPAGTRPADGGGAPAVDKRYETVLTREAFEAWRARIEAAD
LVALDTETDSLDGMRARIVGLSFSVQPHEACYIPLAHTYPGAPDQLPLDEVLAALKSWLE
DGSRAKLGQNVKYDTHVFANHGIAVRGYVHDTLLQSYVLEAHKPHSLESLASRHLDRKGL
SYEDVAGKGAQQIPFAQVELTRATEYSGEDSDMTLDVHRVLWPQLEAAPRLREVYERIEM
PTSVILGRIERHGVLIDSALLARQSAELAQRMVALEQEAHTLAGQPFNLGSPKQIGEILF
NKLGIPAKKKTASGAPSTDEEVLAELAADYPLPAKLLEHRSLAKLKGTYTDKLPLMVNVA
TGRVHTNYAQAVAVTGRLASNDPNLQNIPIRTPEGRRVREAFVAPPGHVILSADYSQIEL
RIMAHISEDPGLLKAFAEGLDVHRATASEVFNVPVAEVSSEQRRYAKVINFGLIYGMGAF
GLASNLGIEQKAAKDYIDRYFARFAGVKRYMDETRARAKELGYVETLFGRRIYLPEINGG
NGPRRTGAERQAINAPMQGTAADLIKLAMIAVQAALDVQQRATRMVMQVHDELVFEVPEA
ELDWARTAVPELMAGVAELKVPLLAEVGVGANWDLAH
NT seq 2814 nt   +upstreamnt  +downstreamnt
atgagcgctcacgacgattcctgcctgttactggtggacggttccagctacctctaccgc
gcctaccacgcgctgcccgacctgcgcaatccggccggcgagccgaccggcgcggtgcgc
ggcatggtggcgatgctgaagaagctgcgcgaggagttcccgtcggcccacgcggcctgc
gtgttcgatgccaagggcaagaccttccgcgacgactggtacccggagtacaaggccaac
cgggcctcgatgccggaggacctggcgaagcagatcgcgccgatccaccaggtggtgagg
ctgctgggctggccggtgctcgagatcccgggcatcgaggccgacgacgtgatcggcacg
ctggcgcgggcggcggcggcgcgcggccagcgggtcgtcgtctcgaccggcgacaaggac
ctggcgcagctcgtcgacgcgcacgtgacgctgatcaacacgatgagcggcgagcggctc
gacgtggccggcgtgacagagaagttcggcgtgccgccctccgcaatagtcgactacctg
acgctggtcggcgatgccgtcgacaacgtcccgggggtcgagaaagtgggcccgaagacc
gccgccaagtggatcgccgagcacggctcgctggacggcgtgatggccgcggccgacgcc
atcaagggcgtggccggcgagaacctgcgcaaggcgctggactggctgccgctgggtcgc
cggctggtgaccgtgaagaccgactgcgatctgtcggaggcactgccgggctggaacggc
acggccgcctgggacacgctgacctggcgcgagaccgaccgcgcagccctgctggccttc
tacacgcacaacgatttccgcgcgtggcgcaatgagctcgagtcggcccgtgccgccgcc
acgccggccccgcaagtggcagcggcggaggccgggcaggggcagagcgcgctgttcgcc
gacccggcgggcaccaggccggctgatggtggcggcgcgccggcggtcgacaagcgctac
gagaccgtgctgacgcgcgaggccttcgaggcgtggcgcgcgcgcatcgaggcggccgac
ctggtggcgctggacaccgagaccgactcgctcgatggcatgcgggcacgcatcgtcggc
ctgagcttcagcgtgcagccgcacgaggcctgctacatcccgctggcccacacctacccg
ggcgcgcccgaccagctgccgctcgacgaggtgctggcggcgctgaagtcctggctcgag
gacggctcgcgcgccaagctcggccagaacgtcaagtacgacacccatgtgttcgccaac
cacggcatcgcggtgcgcggctacgtgcacgacaccctgctgcagagctacgtgctggag
gcgcacaagccgcacagcctggagagcctggccagccgccatctcgaccgcaagggcctg
agctacgaggacgtggccggcaagggcgcgcagcagatcccgttcgcgcaggtcgagttg
acgcgcgccaccgagtattcgggcgaggacagcgacatgacgctggacgtgcacagggtc
ctgtggccgcagctcgaggccgcgccgcgcctgcgcgaggtctacgagcgcatcgagatg
ccgacctcggtgatcctcggccgcatcgagcgccacggcgtgctgatcgacagcgcgctg
cttgcgcgccagagcgccgagctggcgcagcgcatggtggcactggagcaggaggcacac
acgctggccgggcagccattcaacctgggcagccccaagcagatcggcgagatcctgttc
aacaagctgggcatcccggcgaagaagaagaccgccagcggcgcgccgagcaccgacgag
gaggtgctggccgagctggcggccgactacccactgccggccaagctgctggagcaccgc
tcgctcgccaagctcaagggcacctacacggacaagctgccgctgatggtgaacgtggcc
accggtcgcgtgcacaccaactacgcgcaggcggtcgcggtgaccggccgactggccagc
aacgaccccaacctgcagaacatcccgatccgcacgcccgagggccggcgcgtgcgcgag
gccttcgtcgcgccgcccggccacgtgatcctgagcgccgactactcgcagatcgagctg
cgcatcatggcccacatctccgaggatccgggcctgctgaaggcctttgccgagggcctg
gacgtgcaccgcgccaccgcgagcgaggtcttcaacgtgccggtggccgaggtcagcagc
gagcagcggcgctatgccaaggtcatcaatttcggcctgatctacggcatgggagccttc
ggcctggcgagcaacctcggcatcgagcagaaggcggcgaaggactacatcgaccgctac
ttcgcgcgcttcgccggcgtgaagcgctacatggacgagacccgcgcgcgggccaaggaa
ctgggctatgtggagacgctgttcggtcgccgcatctacctgcccgagatcaacggcggc
aacggtccgcgccgcaccggcgccgagcgccaggcgatcaacgcgccgatgcagggcacc
gcggccgacctgatcaagctcgcgatgatcgcggtgcaggccgcgctcgacgtgcagcag
cgcgccacgcgcatggtgatgcaggtgcacgacgagctggtgttcgaggtgcccgaggcc
gaactcgactgggcccggaccgccgtgccggaactgatggccggcgtggccgagctgaag
gtgccactgctggccgaggtgggcgtgggcgcgaactgggatctcgctcactga

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