Methylibium sp. Pch-M: C1M51_03170
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Entry
C1M51_03170 CDS
T05827
Name
(GenBank) hypothetical protein
KO
K20276
large repetitive protein
Organism
metp
Methylibium sp. Pch-M
Pathway
metp02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
metp00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
C1M51_03170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
F5_F8_type_C
He_PIG
F5_F8_type_C_2
GO-like_E_set
PKD_4
PKD
Kelch_6
Big_9
CCP_MauG
Glyoxal_oxid_N
RoxA-like_Cyt-c
YNCE
CBM_AftD
Cytochrom_C
Cytochrome_CBB3
Cadherin_4
Kelch_4
NHL
Motif
Other DBs
NCBI-ProteinID:
QAZ38505
UniProt:
A0A4P6GSG9
LinkDB
All DBs
Position
complement(663706..669792)
Genome browser
AA seq
2028 aa
AA seq
DB search
MSSCTTAARDPWHLPPAAGVPHRGWPPNIVLATAAVELLRCGLVRRSNVRRLLTPLLSKR
DSVRNRQILTGEAIRRIGPGLAVSACLLISACGGGETDNASEATAASSAKARIAAIAAPA
QAVWSAPVPLTLVPSAAANLPNGKVLMWSADSRFDFTSTAGNTYSTLFDPATNMATERLI
NETNHNMFCPGTTNLPDGRLLVSGGSSAGTTSIYNPATGAWAAAAAMNIPRAYQANTILQ
DGSILTLGGSWNGGQGNKHAEIWTEAGGWRRLTGVAVNPMVGPDPGGIFRGDNHMWLIPT
GTGQVLHAGPSANMNWINTQGNGSSVPAGTRGDDAYAINGSTVMYDIGKILKTGGAPAYE
NVDATASSYVIDVNAGLSVRKIAPMSYARAFHNSVVLPNGQVLIVGGQTRPVPFSDDRSV
LIPELWDPVTEAFTAMPAMTVPRNYHGVALLLHDGRVLSAGGGLCGQGCAGNHPDVQILT
PNYLMNSDGSAATRPVINTFPVQVEYGKKMAVTTSSAVTSFVLIRLSSTTHTVNNDQRRI
PLAFASTGTNSYSIDVPTNPGIALPGQYMLFAIDGQGVPSVAKTVRIGAGTAPQLQSPGT
QAGTAGVPVSLSTTATAPNGLGITFRATGLPPGLSMNATTGSITGTPSAGGDFKVSIFAA
TTSGETSTDFMWNVVGATSGPISVRYVRLEEVTEINGGAWASMAEFNLLDTNGATISRTG
WTVSADSQETQGENAPAANAIDGNTATFWHTQWSGANPPPPHTFTVNLGAVRNVGGFKYL
PRQSGANGTIAQFRFYVSADGINWGVPVATGDFSTMGARAVEKTVLFTVPGANQAPTVNS
PGAQSHTQGQTVTLGISASDPDGDTLTYSASGLPAGLNISASTGVISGTVNTAGNYSPTV
TAQDGNGASDTTAFAWTVIPVQPVINPVLAPPVVAGGTATFNVTSNMGAGVQYRWDFGDG
TPETAYSTAATVTHLYAAPGLYTVTVTALSTSGAVKTLSFTQAIYGAISGSTRPSGSTNV
VVETRAGQNPRVWLVNQDNDSVSVFDGVTYNKVAEVAVGVDPRTLAVAPDGRVWVTNKSG
SSISVISPSSLSVVQTIALPRASMPYGLAFAPNGSAAYVALEASGQLLKLNVSSGAVLGS
AAVGANARHLSIPVASDRVFVSRFISPPLPGEGSTVVQTEVAGVKRGGEVVVVTSAMAIE
RTIVLQHSDLPDTTLQGRGIPNYLASPVIAPDGKSAWVPSKQDNVKRGTRRDGLALNFES
TVRAITSRIDLVTFAEDYAARVDHDNSSLASAAAFHPTGAYLFVALQTSRHVAVIDPVRE
VELFRFDAGRAPDGVAVSPDGLTLYVNNFMDRTLGVFDLTRLVRYGEFSVPASAAVDAVA
VEKLSAVVLTGKQFFYDARDTRLSRDAYMSCAACHNDGGHDGRTWDLSSLGEGLRNTISL
RGRAGGQGFKHWSGNFDEIQDFEGQIRTLAQGAGLMTDVQFNTGTRSQPLGTTKAGVSAD
LDALAAYVGSLNTFAPTPNRNADGSLTAAGTAGQAVFASKCSTCHSGTAFTESGASTLRD
IGTLKASSGNRLGGTLTGIDTPTLRDVWATAPYLHDGSAASVTAAIQAHTAIVLTATELS
NVASYVAQIGAEEATAPTSTPGGGGGGTQYVRLEALSEVMGRAYTTMAEFNLLDATGAVI
PRTGWTVVADSQETQGENGAATNAIDGSTTTFWHTQWQAASPPPPHTFTVNLGTARSVGG
FKYLPRQNLSVGRIAGWRFLTSPDGTNWTVVAQGTFTNDATERTVTFQAPTNQVPVLTAV
ANLSTTVGQSATLALSATDPDGDALTYSATGLPAGVAINAGTGLIAGSPTVAGTYNVVAQ
VSDGRGGVANRAFVWTVTAASGGGGTQYVRLEALSEVMGRAYTTMAEFNLLDATGAVIPR
TGWTVVADSQETQGENGAATNAIDGSTTTFWHTQWQAASPPPPHTFTVNLGTARSVGGFK
YLPRQNLSVGRIAGWRFLTSPDGTNWTVVAQGTFTNDATERTVTFTPP
NT seq
6087 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcttgcacaactgcagccagagacccttggcatttacccccggctgcgggggtg
cctcaccgcggatggccgcctaatatcgttcttgccactgcagctgtggagttgctgagg
tgtggcttggtgcgacgcagcaacgtacggcgacttctgactcccctattatcgaaacga
gattcagtgagaaatcgacaaatactgaccggggaggccattcgacgcatcggtccgggg
ctagcggtgtcggcttgcctgctgatctcggcttgcggcgggggcgaaactgataatgcc
tccgaggcgaccgcggcttcttcagccaaggcacgcatcgccgccatcgccgcgccggcc
caggccgtctggtcggcccctgtcccgctcaccctggtgccgtctgctgctgcgaacctg
ccgaacggcaaggttctgatgtggtcggccgacagccgctttgatttcacaagcaccgcc
gggaatacctattcgacgctgttcgatccggccacgaatatggcaaccgaaaggttgatc
aacgagaccaaccacaacatgttctgtcccggcacgaccaacttgccggacgggcggttg
ctggtcagcggcggatcgagcgcggggactaccagcatctacaacccggcaaccggggcg
tgggctgccgcggcagccatgaacattccgcgcgcctaccaggccaacacgatcctgcag
gatggttccatcctgacgctcgggggctcgtggaatggcgggcaaggcaacaagcacgcc
gaaatctggacagaggcgggcggttggcggcgcctgaccggcgtggccgtgaacccgatg
gtggggccggacccgggcggaattttccggggagacaaccacatgtggttgatcccgacc
ggcaccgggcaggtgcttcatgcgggcccgagcgccaacatgaactggatcaacactcag
ggcaatggatccagcgttcccgcgggaacgcgcggcgacgatgcgtacgcaatcaacggt
tccaccgtgatgtacgacattggcaagattctcaagacgggtggtgcgcccgcctacgag
aacgtcgacgccacggcgagttcgtacgtgatcgacgtcaacgccggtttgagcgtgcgc
aagattgcgccgatgagttacgcgcgcgcctttcacaacagcgtggtgttgcccaacggc
caggtcctgatcgtaggggggcagacacgcccagtccccttctccgacgatcgttcggtg
ctgatcccggaactatgggaccccgtgacggaagccttcacggcgatgccagccatgacc
gtgccacgcaattaccacggtgttgcgctgttgcttcacgatggtcgggtgctgtcggcc
ggcggcggcttgtgcggacagggttgtgcaggcaatcaccccgacgtacaaatcctgacg
cccaactacctgatgaactcggacggcagtgcggcgacgcgccccgtcatcaacacgttt
ccggtgcaggtggagtacggcaagaagatggccgtgaccacaagctcggccgtcacatct
ttcgtcctgattcgcctgtcttcgacgacgcacaccgtcaacaacgaccagcggcgcatc
ccgctagcgtttgcgtcgaccggcacgaacagctacagcatcgacgtgccgaccaatccg
ggcattgcgctgccgggccagtacatgctcttcgcgatcgacgggcaaggcgttccctcg
gtggcgaagacggtgcgcatcggtgctggcactgctccgcaactgcagtcgccgggaacg
caggccggaacggccggcgtccccgtttcgctgagcacgaccgcgaccgccccgaacggt
ttgggcatcacgttcagggcgacggggctgcctcccggtctgagcatgaacgcgaccacc
ggcagcatcaccggtacaccgagtgcaggtggtgatttcaaggtcagcattttcgcggcg
accacttccggcgagaccagcacggatttcatgtggaacgtggtcggagccacctcgggc
ccgatctcggtgcgctatgtccgcctggaagaggtgaccgagatcaatggaggtgcctgg
gcctcgatggccgagttcaacctgctcgacaccaacggcgcaacgatttcacgcaccgga
tggaccgtgagcgcggacagccaggaaacgcagggcgagaatgctccggcggccaacgcg
atcgacggcaacaccgcgacgttctggcatacgcagtggtccggcgccaatccgccgccg
ccgcacacgttcacggtgaacctcggcgccgtgcgcaatgtcggcggcttcaagtacctg
cctcgtcagtcgggcgccaatggcacgatcgcgcagttccgcttctacgtcagcgccgac
ggcatcaattggggtgttccggtcgccaccggggacttcagcaccatgggcgccagagcg
gtggagaagaccgtgctgttcacggtacccggggcgaatcaggcgccgacggtcaactcg
cctggcgctcagtcgcacacgcagggtcagaccgtgacgctcggcatctctgcgagcgac
cccgacggagacacgctgacgtattccgcgtcgggcctgcccgcggggctgaacatctct
gcgagcaccggtgtgatcagcggcaccgtgaacaccgccggaaactacagcccgacggtc
acagcccaggatggaaacggtgccagtgataccaccgcgttcgcctggacggtgatcccg
gtccagccggtgatcaatcccgtgctggctccgcctgtcgtggcgggcgggaccgcgaca
ttcaatgtcacatcgaacatgggcgccggggtccagtaccgatgggacttcggtgacgga
acgccggagaccgcctattcgacagcggccacggtcacgcacctctatgccgcaccgggt
ctttataccgtgacggtcactgcgctatcgacttcgggtgcggtgaaaacgctcagcttc
acgcaggcaatctatggagcgatctcaggatcgactcgtccgagcggatcgaccaacgtc
gtcgtcgagacccgcgctgggcagaacccgcgggtctggttggtcaaccaagataacgac
agcgtcagcgtcttcgatggcgtgacctacaacaaggtggccgaagtcgcggtcggggtc
gatccgcggaccttggctgtggctcccgatggtcgcgtgtgggtcaccaacaagagcggc
tcgagcatcagcgtcatcagtcccagcagcctgtcggtggttcagacgattgcactgcct
cgggcttcgatgccctacggacttgccttcgcgccgaatggcagcgctgcctatgttgcg
ctggaagccagcggccagctgctgaaactgaacgtcagctcgggggctgttttgggatcg
gccgcggtaggcgccaatgctcgccatctttcgatccccgttgcgagcgatcgcgtcttc
gtttcgcgattcatttcgccgcccttgccgggtgaggggagcacagtcgttcagaccgag
gtggccggggtcaagcgtggcggtgaggtggtggtggtgacgtccgccatggcgatcgag
cgcaccatcgtcctgcagcacagcgacttgccggacaccacgctgcagggtcgcggtatt
ccgaactatctggcgtcgccagtgattgcaccggacggaaagagtgcttgggtcccatcg
aaacaggacaacgtcaagcgcggaacccggcgcgacggcttggccctgaacttcgaaagc
acggtgcgcgcgatcacctcgaggatcgacctggtgaccttcgcggaagactatgcggcc
cgcgtcgatcacgacaactcgagtctcgccagtgccgcggccttccacccgaccggggcg
tatctgttcgtcgcgttgcagacgagccgtcacgtcgcggtgattgatccggtccgggaa
gtcgaactgttccgcttcgatgcggggcgcgcacccgatggggtcgccgtctcgcccgac
ggcttgaccctgtatgtcaacaacttcatggatcggactctgggggtcttcgatctgacg
cggctggttcggtatggcgagttcagcgtgcctgcgtctgcagccgtcgacgcggtcgcc
gtcgagaagctctcggccgtggttctgacgggcaagcagttcttctacgatgcccgcgac
acccggttgtctcgcgatgcgtacatgagttgcgcggcttgccacaacgatggtgggcac
gatgggcgcacatgggacctgagcagcctgggagaagggctgcgcaacacgatcagcctg
cgcggtcgggctggtggacagggcttcaagcattggagcggaaatttcgacgagatccag
gatttcgaggggcagatccgaacgcttgcgcaaggcgccgggctgatgacggacgtgcag
ttcaataccggaacacggtctcagccgttgggcacaacgaaggccggggtcagcgcagac
cttgacgcgctggcggcctacgtgggctcgctcaatacgttcgcgccgacgccgaatcgc
aacgcagacggtagtctcaccgcagctgggacagcaggccaggccgtgttcgccagcaag
tgctcgacatgccattctggaacggcgttcaccgagagcggagccagtacattgagagac
attggcacgctcaaggcctccagcggcaaccgtttgggcggaacgttgacggggatcgac
acaccgacgcttcgcgatgtttgggccacggcaccttatctgcatgacgggtctgcggca
agtgtgactgcagccatccaggcgcacacggcgatcgtgttgacggcgactgaactgtcc
aacgtcgcgtcgtatgtcgctcagatcggcgccgaggaagccaccgccccgacgagcacg
cccggcggcggtggaggcggtacacagtacgtgaggctggaggctctgtcggaggtgatg
gggcgggcgtacacgacgatggcggagttcaacctgctggatgcgaccggagcggtcatt
ccgcgcacggggtggacggtggtggccgacagccaggagacgcaaggcgagaacggcgcg
gcgacgaacgcgatcgacggcagcacaacgacgttctggcacacgcagtggcaggcagcc
agcccgccgccgccgcataccttcacggtgaacctgggcacggcgaggtcggtgggtgga
ttcaagtacctgccgaggcagaacctgagcgttggccggatcgcgggctggcggttcctg
acgagtccagacggcaccaactggacggtagtggctcaaggtacgttcaccaacgacgcg
acagaacgcaccgtgaccttccaggcaccgacgaaccaggtaccggtgctgacagccgtt
gcgaatctctcgacgacggtcgggcagagcgctacgttggcactgagcgcgaccgacccg
gacggagacgcgctgacctactcggctaccgggctgccggcgggcgtggccatcaatgcc
ggaacgggcctgatcgccgggagcccgacggtggccggcacctacaacgttgtcgcccag
gtcagcgatggccgtggaggtgtggccaatcgagctttcgtctggacggtcacggccgcc
agcggtggaggcggtacacagtacgtgaggctggaggctctgtcggaggtgatggggcgg
gcgtacacgacgatggcggagttcaacctgctggatgcgaccggagcggtcattccgcgc
acggggtggacggtggtggccgacagccaggagacgcaaggcgagaacggcgcggcgacg
aacgcgatcgacggcagcacaacgacgttctggcacacgcagtggcaggcagccagcccg
ccgccgccgcataccttcacggtgaacctgggcacggcgaggtcggtgggtggattcaag
tacctgccgaggcagaacctgagcgttggccggatcgcgggctggcggttcctgacgagt
ccagacggcaccaactggacggtagtggctcaaggtacgttcaccaacgacgcgacagaa
cgcaccgtgacctttacgccgccgtga
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