Methylibium sp. Pch-M: C1M51_03590
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Entry
C1M51_03590 CDS
T05827
Name
(GenBank) geranylgeranyl pyrophosphate synthase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
metp
Methylibium sp. Pch-M
Pathway
metp00900
Terpenoid backbone biosynthesis
metp01100
Metabolic pathways
metp01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
metp00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
C1M51_03590
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
metp01006
]
C1M51_03590
Enzymes [BR:
metp01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
C1M51_03590
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
C1M51_03590
2.5.1.29 geranylgeranyl diphosphate synthase
C1M51_03590
Prenyltransferases [BR:
metp01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
C1M51_03590
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
QAZ38582
UniProt:
A0A4V0YMQ6
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All DBs
Position
complement(765923..766804)
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AA seq
293 aa
AA seq
DB search
MKPITRIEQSLAAALATGEQEGCPLKLAGAIRHAVFPGGARIRPQLCLAVAQACGDDDPG
LSEAAAVSIELLHCASLVHDDLPCFDDAATRRGRASVHFAFGESLAVLAGDALIVLAFQA
LSEGAVRSPQRLAPLLATIARGVGMPSGIVAGQAWECEPRVSLAQYQRAKTGALFVAATM
AGAQACGVEPEPWRALGDCLGEAYQVADDIRDVAADPDLLGKPMGRDAALCRPSAAGQLG
LDGAVRLFDALVERAIAAIPPCPGAAQLRALVRAEAERLVPQSLSGELVRVAA
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgatcacacgcattgagcaatctctggcggcagcgctcgctaccggcgagcag
gagggctgcccgctgaagctcgccggcgcgatccggcacgcggtgtttcccggcggcgcg
cggatccgcccgcagctctgcctggcggtggcgcaggcctgcggcgacgacgaccccggc
ctcagcgaggccgcggcggtgtcgatcgagctgctgcactgtgcgtcgctggtccacgac
gacctgccatgcttcgacgatgcggcgacgcggcgcgggcgggcctcggtgcacttcgcg
ttcggcgaaagcctggcggtgctggctggcgacgccctgatcgtgctggccttccaggcg
ctgtcggagggcgccgtgcgctcgccgcagcggctcgcgccgctgctggccacgatcgcc
cgcggcgtgggcatgcccagcggcatcgtggccgggcaggcctgggagtgcgagccgcgc
gtctcgctggcccagtaccagcgcgccaagaccggcgcgctgttcgtggcggccacgatg
gccggggcccaggcctgcggcgtcgagccggagccctggcgggcgctcggcgactgcctc
ggcgaggcttaccaggtggccgacgacatccgcgatgtcgcggcggatcccgacctgctc
ggcaagcccatgggccgggacgccgcgctctgccgccccagcgccgccggccagctcggg
ctcgacggcgcggtgcggctgttcgacgcgctggtcgagcgggccatcgccgcgatcccg
ccctgtccgggcgcggcgcagctgcgtgcgctggtgcgggccgaggccgagcggctggtg
ccgcagtccctgagcggcgaactggtgcgcgtggccgcctga
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