Methylibium sp. Pch-M: C1M51_05470
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Entry
C1M51_05470 CDS
T05827
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
metp
Methylibium sp. Pch-M
Brite
KEGG Orthology (KO) [BR:
metp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
metp03021
]
C1M51_05470 (rpoH)
Transcription machinery [BR:
metp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
C1M51_05470 (rpoH)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
IF2_N
HTH_3
Motif
Other DBs
NCBI-ProteinID:
QAZ41376
UniProt:
A0A4P6H0P4
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All DBs
Position
1168993..1169925
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AA seq
310 aa
AA seq
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MSLNTSAGSQALTVRDPWALVPSLGDLNAYIAAVNRLPMLTLEEEQSLGQRLRDEHDLEA
AGRLVLSHLRLVVSVSRQYLGYGLPHGDLIQEGNVGLMKAVKRFDPSQGVRLVSYALHWI
KAEIHEYVLRNWRMVKLATTKAQRKLFFNLRSMKQGFKGDATDSDLHRSTLTDAEIDIVA
SELKVKREEVIEMETRLSGGDVALDPQTDDGDESYAPIAYLADDRHEPTRVLDAQRRDAL
AGDGIGEALDVLDARSRRIVEERWLKVNDNGSGGMTLHELAAEYGVSAERIRQIEVAAMK
KMRKALAAYA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
ctgtcgcttaacacttccgcgggctcgcaggcgctgacggtgcgcgacccgtgggcgctg
gtcccgtcgctcggcgacctgaatgcctatatcgccgccgtgaaccgcctgccgatgctg
acgctcgaggaagagcagtcgctcggccagcggctgcgtgacgaacacgacctcgaggct
gccggccgtctggtgctgtcgcacttgcgtctggtcgtgtcggtatcgcgccagtacctg
ggctacgggcttcctcacggcgacctgatccaggaaggcaatgtcggcctgatgaaggcc
gtcaagcgcttcgaccccagccaaggcgtgcgactggtcagctatgcgctgcactggatc
aaggccgagatccacgagtacgtgctgcgcaactggcgcatggtcaagctggcgaccacg
aaggcgcagcgcaaactgttcttcaacctgcgctcgatgaagcagggtttcaagggcgat
gccaccgacagcgacctgcaccgcagcacgctgaccgatgccgagatcgacatcgtggcc
agtgaactcaaggtcaagcgcgaggaagtcatcgagatggagacgcgcctgtcgggaggc
gatgtcgcgctcgatccgcagaccgacgacggtgacgagagctacgcgccgatcgcctat
ctggccgacgaccgccacgaaccgacgcgtgtgctcgacgcccagcgccgtgacgcgctg
gccggcgacggcatcggcgaggcgctggatgtgctggacgcgcgcagccgacgcatcgtc
gaggaacgctggctcaaggtcaacgacaacggctcgggcggcatgacgctgcacgaactg
gccgccgagtacggcgtcagcgccgagcggatccgtcagatcgaggtagccgcgatgaag
aagatgcgcaaggcgctggccgcctacgcctga
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