Methylibium sp. Pch-M: C1M51_07910
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Entry
C1M51_07910 CDS
T05827
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
metp
Methylibium sp. Pch-M
Brite
KEGG Orthology (KO) [BR:
metp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
metp03400
]
C1M51_07910
DNA repair and recombination proteins [BR:
metp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
C1M51_07910
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Gene cluster
GFIT
Motif
Pfam:
Vsr
MTES_1575
DUF559
Motif
Other DBs
NCBI-ProteinID:
QAZ39361
UniProt:
A0A4P6GTJ2
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All DBs
Position
complement(1658963..1659370)
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AA seq
135 aa
AA seq
DB search
MSRNRGRDTKPEKLLRKACWSVGLRYRLGSKVIGKPDFVLGRAKVAVFVDGCFWHGCPEH
YKAPATRADFWLKKLQSNRMRDELVNIQLAAEGWTVVRIWEHTVKRDLSAAVETVLQARQ
ASSRVPSSSAKAAFT
NT seq
408 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgcaaccgcgggcgtgacacgaagccggagaagctgcttcgcaaggcttgctgg
tcggtcggcctacgctataggttgggctccaaggtcatcggcaagccagactttgtgcta
ggtcgagcaaaggtggccgtctttgtggacggctgcttctggcatggctgtcctgagcac
tacaaggctcccgcaaccagggccgacttctggctcaaaaagcttcagagcaaccgcatg
cgtgacgagctggtcaacattcagcttgctgccgaaggttggactgtcgtgcgcatatgg
gagcacacggtcaagcgagacctatctgctgctgtcgagacggtgcttcaagctcggcag
gcctccagcagggtgcctagctcttcagccaaggccgccttcacctga
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