Methylibium sp. Pch-M: C1M51_11540
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Entry
C1M51_11540 CDS
T05827
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
metp
Methylibium sp. Pch-M
Brite
KEGG Orthology (KO) [BR:
metp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
metp03000
]
C1M51_11540
Transcription factors [BR:
metp03000
]
Prokaryotic type
Helix-turn-helix
Other families
C1M51_11540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
AAA_lid_14
HTH_8
AAA_5
AAA_2
HTH_30
HTH_29
HTH_23
HTH_7
Mg_chelatase
AAA_3
HTH_28
AAA
HTH_22
Phage_NinH
PAS_8
nSTAND3
AAA_7
PreAtp-grasp
HTH_Tnp_1
AAA_16
Motif
Other DBs
NCBI-ProteinID:
QAZ40001
LinkDB
All DBs
Position
complement(2417855..2419993)
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AA seq
712 aa
AA seq
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MTASTTATRAAQRDSRRPSGFGHSATSVWLPPDPGHVDTIAQSHERCASLRLSPIRPPDH
TPLMRSDLAVARERNRCLSLHAVPVMEMLLEQILATQSMVLLTDVQGTVLHSIGHDDFLT
RASKVALAPGVNWSESSKGTNAIGTALVTETPTIVHADEHFVHANQFLTCSSSPIFDPRG
NLVGVLDVSGDHHSFHVHTMGLVKMSARMIQNHWLIEDSHQTLRLHFHLRRDYLGTLMEG
IVSVGQDGKLLAANRAALDMLRLSGAALRMNTVTGLFGVSLGALVDHFGSTLSTPLELSL
PDGRQIHANARFNGTGWHQLGRVRDDQPEALAHEAAREPAARDALPDTAREPTAHPNAVP
PSPSLRQLQTGDARMDDVVTRVKRVLDRDIPVLIQGETGTGKEMLARAIHQGSRRASGPF
IAVNCASIPETLIESELFGYEEGAFTGARRKGAVGKVLQAHGGTLFLDEIGDMPLGLQAR
LLRVLQEREVTPLGGTRALPVDVSVISATHQPLRELIDRKQFREDLYYRLNGLVVQLPAL
RERTDLLALTEKLLKRECRGRLLRLDAEVLRLMQACRWPGNIRQLATVLRTAVAMAGDDA
VITVDHLSEDFLQDARRTLDEEPASVAASRPPVSMAQHVSPHPSDAAAPDGLGSVQVGEA
PSGRSTLHQLEHDTVRRALAEAGGNISVAARRLGISRNTIYRKLYWPPGAGR
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcatccaccaccgccacgcgcgctgcccagcgtgacagccggcgcccgtccggg
ttcggccattccgcgaccagcgtctggctgccgccggacccgggtcacgtcgacaccatc
gcccagtcgcatgaacgctgtgcctcgctgcggctgagcccgatccgtccgccggaccac
accccgctgatgcgctcggatctggcggtggcccgggagcgcaaccgctgtctgtcgctc
catgcggtgccggtgatggagatgctgctggagcagattctcgcgacgcagagcatggtg
ctgctgaccgacgtgcaaggcacggtgctgcattcgatcggtcacgacgacttcctgacg
cgtgcctccaaggtcgcgctggcgccgggcgtcaactggagcgaatcgagcaagggcacc
aacgccatcgggaccgcgctggtcaccgagacgccgaccatcgtgcatgccgacgagcac
ttcgtccacgccaaccagttcctgacctgctcgtcctcgccgatcttcgatccgcgcggc
aacctggtcggcgtgctcgacgtcagcggcgaccaccattccttccacgtccacacgatg
ggcctggtgaagatgtctgcgcgcatgatccagaaccactggctgatcgaggacagccac
cagaccctgcgcctgcatttccacctgcgtcgcgactatctcggcacgctgatggaaggc
atcgtctccgtcgggcaggacggcaagctgctggccgccaatcgcgctgcactggacatg
ctgcgcctgtcgggcgcggctttgcggatgaacacggtcaccggcctgttcggcgtgtcg
ctcggagcgctggtcgaccatttcggctcgaccctgtcgacgccattggagctgagcctg
cccgacggccgccagatccatgcgaacgcccgcttcaacggcaccggctggcaccaactg
ggccgcgtccgtgacgatcagccggaggcgctcgcccacgaggcggcccgcgagccggcc
gcccgcgacgcgctgcccgacaccgcccgcgaaccgacggcccatccgaatgccgtgccg
ccgtcgccgagcctgcgacagctgcagaccggggatgcgcgcatggacgacgtggtcacg
cgcgtcaagcgagtgctcgaccgcgacatcccggtgctgatccagggcgagaccggcacc
ggcaaggaaatgctggcccgcgcgatccaccagggctcgcgccgcgcgagcggccctttc
attgccgtcaactgcgcatcgattcccgagaccctgatcgagtcggagctgttcggctac
gaggaaggcgcgttcaccggtgcgcgccgcaagggcgccgtcggcaaggtcctgcaggcg
cacggcggcacgctgttcctcgacgagatcggcgacatgccgctgggcctgcaggcgcgg
ctgctgcgggtgctgcaggaacgtgaggtcacgccgctcggtggcacgcgggcgctgccg
gtcgatgtatcggtcatcagcgcgacccatcaaccgctgcgagaactgatcgaccgcaag
cagttccgcgaggacctgtactaccgcttgaacggcctggtggtgcagctgccggcgctg
cgcgagcgcaccgatcttctggcgctgaccgagaagctgctgaagcgcgagtgccgtggt
cgtctgctgcgcctcgacgccgaggtgctgcggctgatgcaggcttgccgctggccgggc
aacatccgtcagttggccaccgtgctgcgcaccgcggtggcgatggctggcgacgatgcc
gtgatcaccgtcgaccacctgtccgaagactttctgcaggatgcgcgccgcacactggac
gaggagcccgcctcggtcgctgcctctcggccgccggtgagcatggcccagcacgtcagc
ccgcacccctcggacgcggcagcacccgacggccttggcagcgtccaggtcggcgaggcg
ccgagcggacgcagcacgctgcaccagctcgagcacgacaccgtccgccgcgcgctggcc
gaggccggcggcaacatctcggtcgccgcccggcgcttgggcatcagccgcaacacgatc
taccgcaagctctactggccgccaggcgcgggccgctga
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